Chiloscyllium plagiosum (whitespotted bambooshark): 122561398
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Entry
122561398 CDS
T08871
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122561398 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122561398 (vti1a)
Membrane trafficking [BR:
cpla04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
122561398 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
LMBR1
Sec8_N
DUF5344
DUF4400
Laminin_II
DPM3
DUF3087
Motif
Other DBs
NCBI-GeneID:
122561398
NCBI-ProteinID:
XP_043569098
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Position
22:34095854..34399898
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AA seq
212 aa
AA seq
DB search
MTGAYVIWNVCSFLYSLDDKKSMVANVEKQMEEARELLEQMDLEIREIPLQSRGLFSTRM
KSYKQELEKLDKDFKRSRIAYSDEVNLRNELLGEDGNTSENQLIKLREERACLLDNTERL
ERSTRRLEAGYQLTVETEQIGQEILENLHHDKEKIQRARERLRETDTNLGKSSRILTGML
RRIIQNRILMFILGAIILLTIVLAIYFAVTGH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagcttatgtgatatggaatgtttgttcatttctttattctctagatgacaaa
aaaagtatggttgcaaatgtggaaaagcagatggaagaagctcgggaactgcttgaacaa
atggatcttgagatacgggagataccactccaaagtcgtggcctattcagcacccgaatg
aaaagttataaacaggaattggaaaaacttgataaagattttaaaaggtcacggatcgcc
tacagtgatgaggtaaatcttcgaaatgagctcctaggggaagatgggaatacctctgag
aaccagttgataaaattgcgtgaagagagagcgtgtctgttggataacacagagcggttg
gaaaggtcaacacggagattggaggctggataccaactaaccgttgaaactgaacaaatt
ggacaggagatcctagagaatcttcaccatgacaaagaaaagattcaacgagctcgggaa
aggctgcgtgaaactgataccaaccttggtaagagctccaggatcttgacaggaatgttg
cgaaggatcatccagaaccggatcctcatgtttatcctgggtgccatcattcttctcacc
attgtgctggccatttattttgctgtcacaggccactga
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