Chiloscyllium plagiosum (whitespotted bambooshark): 122561547
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Entry
122561547 CDS
T08871
Symbol
fgd6
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122561547 (fgd6)
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
122561547 (fgd6)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
PH_8
PH_9
Motif
Other DBs
NCBI-GeneID:
122561547
NCBI-ProteinID:
XP_043569243
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All DBs
Position
23:3414816..3555628
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AA seq
1422 aa
AA seq
DB search
MSAGIKKPPVAPKPRITLGKKPPPPPVAPKPDILISEPFSTHKGPKPALAPKPILPKVTP
VAEVKPTPLQINKCSEKTKREWSENVKCSTCQGDGMQKGDCELIQHCVIANYSCKTEYEH
KYINGENTDKTQLVIDHLSKLEPLEKSKKYNQANYSSRVWHRPETQNGKKVNKYQIMSKT
SFPEQKFKDVLTQVVSPNNYLPKQKDALGDADIKLHSSSNGQTEVFNTDQTFQNIRSSKR
NTGEPFVIGNKDYEVKNVAEPSENEMKNGKNCHSSGTDLKESVHDNQSKVLFMVAEKEKL
TFQDNSSINTSTFASVPCVKPIPMPKPKKVRLVGLIRQNCIDNCMEDAVCPNEMGNNLCF
KTPDGTAVDLKKSVISLDAGSVFMSKNESSYQTVKMNSASLQDNIAELSHSKDSCNQSVL
HPKKPVLDCVTKVKISSDLQNKSKIEQIKKDLESGNRTLPADSKSSFIRSSSLSMSLPKY
LSLSYAPKVPVSSNDSGSDFDRVLSNEAMSTKSDISPKIMPEKPQRHSLPSSVIVKKDLS
VSNEKSASGSIENDSEEGIGSLSTTETKTSSSEHKAVHLSEKPVWKLPHPILPFLGSPGT
VTLTSTSPNNEVAISKPRAKSLSSADSEKLEKSLKAPSKKNSFKRILGIKLSAKMKTDFP
KFLTKGSYSLDSTPDGFLSMENKDNNLCLSGSMTGDREIKPMKAHSVDSCYPTKKGQILK
NPSVFPTNAPAQQESHVQRHKEWAQNFKVHLTEQQSLTPEYENISGNFDWKSSSSVEDCD
SSFYEIQPYAVSTCYQKYAATQKSQCISPIQDQDNRSLEMDINSDEEEIIFSSDEEDTSS
DTSKGELDQQEKKQNGEGKKTKVYHIAREIMSSEKVFVDVLKLLHIDFRDSVIQSSRQYG
KQVIEDKILNQILYYLPQLYELNRGLLRELEERMAHWEEHQRIADIFVEKGPYLKMYSTY
IKEFDKNVCLLDEQCKKNPTFAAVVREFEMSTRCANLALKHYLLKPVQRIPQYKLLLTDY
MKNLSKDCADYKDTQAALAIVVEVANHANDIMKQGDNFQKLMQIQYSLNGQQEIVQPGRV
FLKEGTLMKLSRKVMQPRMFFLLNDVLLYTTPVQSGMFKLNNMLSLAGMKVSKPSQEAYQ
NELNIESVERSFILSASSAAERDEWLEAISKAIEDYTKKRITFTGSKSLEEEPDKPELNT
PLGTKAPIWIPDPRATMCMICTCDFTLTWRRHHCRACGKIVCQACSVNKFNLDYLKKRPA
RVCDLCFSELQKREVQSPDPKMLSPTHKSSSALTSVFHSIQHSSGRKHKKIPAALKEVSA
NTGASSMSGYLYRSKGIKKPWKRLWFVIQDKVLYTYAASEDVAALESQPLLGFTVSEVQD
DLSEPKVIFQMLHKSTLFYVFKADDHHTAQRWVEVFQEATVL
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggaattaagaagccaccagtggcccctaaaccccgaattactttgggaaag
aagccacctcctcctccagttgcgccaaagccagacatcctcatatcagaaccattctca
acacataagggaccaaagccagcattagcaccaaaaccaatattgccaaaagttacacct
gtggctgaagtcaaaccaacaccactgcaaattaataaatgttcagagaaaactaagcga
gaatggagtgaaaatgtcaagtgttcaacttgtcaaggtgatggaatgcaaaagggagac
tgtgaattgatccaacattgtgtcatagcaaattactcatgtaaaactgaatatgagcat
aaatatataaatggtgaaaatacagataaaacacaacttgtcattgaccacttgtccaaa
ttggaacctttagaaaagagcaaaaaatacaaccaagcaaattattcctctagagtatgg
cacagaccagagactcagaacggcaaaaaagttaacaagtatcagataatgagtaaaact
agtttcccagagcagaaatttaaagatgtgctaactcaggttgtatcaccaaacaattat
cttccaaaacaaaaagatgcacttggtgatgcagatatcaaattgcacagtagtagcaat
gggcaaactgaagtgttcaatactgaccaaactttccaaaatataagaagttccaaaaga
aatacaggggagccatttgttattgggaataaagattatgaagttaaaaatgttgctgaa
ccatcagaaaacgaaatgaaaaatggaaaaaattgtcactcctctggtactgatctcaaa
gaaagtgtgcatgacaaccagtcaaaggttctatttatggttgcagaaaaggagaagttg
acttttcaggataattcttcaattaacacttcaacattcgcttcagtgccttgcgtcaaa
ccaattcctatgccaaagccaaaaaaagtacgtcttgttggtctcatcaggcagaactgt
atagacaactgtatggaagatgcagtgtgtcctaatgagatgggcaacaatctttgcttc
aagactccagatggaactgctgtagacttgaagaaatcagttatttccttggatgctgga
agtgtttttatgagtaaaaatgaaagttcatatcagactgtcaagatgaacagtgcatca
ttacaggataacattgctgaacttagtcactcaaaagattcttgtaatcaaagtgtttta
caccccaaaaagcctgttctggactgcgtcactaaagttaaaatctcttcagacttgcaa
aataaaagtaaaatagaacaaataaagaaagatttggaaagtggcaacagaacattgcca
gcagacagcaaaagcagttttattagaagtagctcgctctctatgagtttgcccaaatac
ctcagtttgtcatatgctccaaaagtgcctgtatcaagtaatgatagtggttcagatttt
gatagagtgctgagcaatgaagcaatgtccacaaagtcagacatctctccaaagattatg
ccagaaaaaccacagcgtcacagcctgccttcatctgttatagttaaaaaggatctgtca
gtaagcaatgagaaaagtgcaagtggttcaatagaaaatgattcagaagagggaattggc
agtttatccaccacagaaactaaaacatctagtagtgaacacaaagcagttcatctgagt
gagaaacctgtatggaaattgccacatcctattttgccttttctggggagtcctggcact
gtaacactaacaagtacttcaccaaataatgaagtcgctatatcaaagccaagagctaag
tctttgtcatctgctgattctgaaaagctggaaaagtcactaaaagcgccttcaaagaaa
aattcatttaaacgaattcttggtataaaactctctgctaaaatgaaaactgactttcca
aaatttttgacaaaaggcagctattcactagacagcacaccagatggatttctttctatg
gaaaataaggacaataatctctgcctttcagggtccatgacaggtgatcgagagattaag
cctatgaaagcacactctgtggattcctgctatcccacaaagaaagggcaaatacttaaa
aacccctctgtttttccaactaatgctcctgctcaacaggaatctcatgttcaacgccac
aaagaatgggcacagaattttaaagtgcatttgactgagcaacagtctctcactcctgaa
tatgaaaacatcagtggcaattttgactggaaaagttcttccagtgttgaagactgtgac
agtagtttttatgaaatacaaccctatgcagtatcaacctgctatcaaaaatatgctgca
actcagaagagccagtgtatcagcccgatacaggatcaggataaccgttctttagaaatg
gacatcaactcagatgaagaagaaatcatttttagctccgatgaagaagataccagttca
gatacaagtaaaggagaactggatcagcaagagaagaagcagaatggcgaaggaaagaaa
accaaagtgtatcatattgccagagaaatcatgagctctgagaaagtatttgtggatgtt
ttgaagcttttgcacattgatttcagggattcagtaatccaatcttcaagacagtatgga
aagcaagtgattgaagataagatcttgaaccagatcctgtactacctgccacagctgtat
gaactaaatcggggtctgctacgagaattggaagaaagaatggcacactgggaagagcat
cagagaatagctgatatctttgtggagaagggaccatacctcaagatgtactcaacctat
atcaaggagtttgacaagaatgtttgtttgttggatgaacagtgcaagaagaaccctact
tttgctgctgtggttagagaatttgagatgagcactcgctgtgcaaatctggcactcaag
cattacctgttaaaacctgtccagaggattccacaatacaagctgcttctaacagattat
atgaagaacctgtcaaaagactgtgctgactacaaagatactcaagctgctcttgccatt
gttgtagaagtagcaaaccatgctaatgacataatgaaacaaggggataacttccagaag
ctgatgcagattcaatatagcctaaatggccaacaagagattgtacagcctggaagggtt
tttttgaaggaaggcactttgatgaagctgtctagaaaggttatgcagccccgaatgttt
tttttgctaaatgatgtgttattgtacactacaccagtacaatctggaatgttcaagctg
aacaatatgctttctctagcaggtatgaaggtcagtaagccgtctcaagaagcctatcaa
aatgaactgaacatagagagtgttgaacgatctttcattctttcagcaagttcagcagca
gaaagagatgaatggttagaagccatttccaaagccattgaggactacacaaaaaaaagg
ataacattcactggaagtaaaagccttgaggaagaaccagacaaaccagaactaaataca
cccctgggcacgaaggcacccatatggatccctgatcctcgggctaccatgtgcatgatt
tgtacatgtgactttacacttacttggaggcgacatcattgtagagcatgtggaaagatt
gtttgtcaagcctgctcagtaaacaaatttaatttggattaccttaaaaagcgacctgca
agagtttgtgatctctgcttctcagaattgcaaaagagagaagtacagtcacctgatcca
aagatgctgtctccaactcacaaatcgtcaagtgcccttacctcagtttttcacagcatt
cagcattcttcaggacggaagcacaagaaaattccagcagcactgaaagaagtatctgct
aatacaggagcatcatcgatgagtggctacctttataggtcaaaaggtattaagaaacca
tggaaacgactctggtttgtcattcaggataaggtgttatatacttatgctgccagtgag
gatgtggctgcattagagagtcaaccattgctgggcttcacagtttctgaagtccaggat
gatctctcagaacccaaagtgattttccagatgcttcataagagtacactgttttatgta
tttaaagcagatgatcatcatacagcccaaaggtgggtagaagtttttcaagaagctact
gtgttataa
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