Chiloscyllium plagiosum (whitespotted bambooshark): 122561661
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Entry
122561661 CDS
T08871
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122561661 (lamb4)
04518 Integrin signaling
122561661 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122561661 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
Alanine_zipper
ZapB
Med9
Motif
Other DBs
NCBI-GeneID:
122561661
NCBI-ProteinID:
XP_043569548
LinkDB
All DBs
Position
23:17689445..17810183
Genome browser
AA seq
1804 aa
AA seq
DB search
MIAQKRMMLQIFAILVLLKVVSGQGDCTAGSCYPPLGDLLVGRSSQLSASSTCGLNRPEK
YCILSHLQDEQKCFTCDSRLPYNHISSTNSHRIENVITAFEPDRKRKWWQSKNGVHHVSI
RLDLEILFQFSHLFLSFKTFRPAAMLVERSSDFGQTWRVLRYFAYDCASAFPNIPRGPGQ
RVDDVICDSKYSDLEPSTGGEVVLKALDPHFQINDPYSHEIRELITFTNLRINFTQLHTL
GDTRLRRRQARANEKYYYALYEMVVRGSCFCYGHASQCIPLENIRGDVFDQQGMVHGRCI
CQHNTDGANCERCKDFYNDSPWQPAIGSERDECRRCNCNGHSEKCHFDMAVYLASGEVSG
GICDECQHNTMGQNCNQCKPFFYQDPGRMISDPYACVACNCDPGGSLNNGMCESHTDPSL
GTVAGRCICKRNVEGTRCDQCKPGYFGLSAVNPEGCEECRCDSRGSVSVHSVCDAISGEC
HCHRYVTGKNCEQCLPSYWGLGNINYGCSPCDCDIGGAYDNFCSLHDGQCRCLPNIIRRQ
CNEPAPGYFFAPLDYYLYEAELAKPIGNSGSLVGPTSLPPCDEYLRRQGYNFRVEHGTLI
LQRITKRHMQHQRKRQVMNPESQVQIVSREYVPGGPTTWTGLGFARVLRGTGLRFIVDNI
PYPMDFTAAIRYESESAGDWMASIQVWPTNQPSNSQCRNNLPSREPNTVTLPATSRITFL
HIPICLEPSVQYIVEIYFHSLPTPNNQFSDHILIDSLGLIPMINSLEDFNSKTDLDEYRR
YRCVDAAYQVVPQTIPEVCERLIASMSARIHNGAIPCCCNPQGSISRICSKFGGQCQCKP
GVIGRCCDSCAPGFYGFGANSCSPCYCNRQGAIDSICDQRTGQCRCHRNTVGHACDRCRP
GYYGFPTCRPCQCNSHSESCNPQTGICVNCRAFATGNNCERCSEGYFGNPSLNEPCRPCQ
CPDIPNSGRYFAHSCYKDSRTQQLVCNCLEGHSGSRCERCSPGFYGTLIGIGDHCLPCSC
NDNIDRRDPGACDPQTGKCLKCLHNTYGPNCQYCKPGYYGSALNKDCKQCTCNGIGLDRG
RCVPNSLCMCDQATGQCPCLPNVVGNSCVKCAPGFWNLRSGRGCKPCYCDPQNSVSSQCD
EVTGQCQCKAGYSGKTCSECQDNYYGNPRIQCISCNCSLEGTERPACDKTTGACKCREGV
TGQHCNKCAWGYCKEFPKCTECHPCFKLIDEEICSIIRATESLINKTNFVPGQTPGPSYN
ERLKKLGKKFAAVANKLNDSVASPDAFEKTKDYFDKIREIKMQINTHLNISNNTEQHNRD
IDDLNEEIDKLSQKVNRFGNDSRTIANASGNFEDINKYYQNSKTSQQKVNDSELVLNNSN
MTREKAAALLNKTMLINRDEIHALNNKTKLLELSILKICGGQGNISCNESQCDEALCHDR
FGNQRCNASNCTGILTLANSAYTRNNETINQMNDLLEKLQNAISTIDSLRNMTQETKDKA
NKLSDKVATSKDELEKEKQETKAIIDKVKEFLSADGVSPEDLEKIANHVLSIKLPISREE
LVNKSKQIQNIISEIKDLEKELERMNRWSEEAKTLLIRAMKTVKVTEEIPNPEELQEDLD
KIKEAQKNVTDAIIGIRVNLNNSDTAISQIKKKTESIFETLMQLMNNVTKLQNEAEEVKN
KTDNNKIMAQKAKEKANRAKAHAEEAEQEFQKMNETYVKLSNINIQKIPPDGKQKAEQLQ
QDAADLAKDLEEKLQRITALEKKLQDGYQKIKEKEDYLSDLEQNVTSIKAFIDSKVSHYV
DCFP
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgattgcacaaaaaaggatgatgctacagattttcgcaatccttgtgttgctaaaggtt
gtctctggtcaaggggattgcactgctggttcttgttacccacctcttggagacctgctt
gtgggccgtagcagtcagctatctgcttcctcaacctgtggtctgaataggccagaaaaa
tattgtatcctcagtcacttacaggatgaacagaagtgttttacttgtgattcaagatta
ccttacaaccatatcagctctaccaacagccatcgcattgaaaatgtgatcactgctttt
gaaccagatcggaaaaggaaatggtggcagtctaaaaacggtgtgcaccatgtcagcatt
cggctggatctggaaatcctttttcaattcagtcaccttttcctttccttcaagacattc
cgcccagctgcaatgttggttgagagatcctcagattttggtcaaacatggagagtgttg
cgatattttgcctatgattgtgcatccgccttcccgaatattccccgtggacctggacag
agagtggatgatgtaatctgtgattcaaagtattctgaccttgaaccttcaacaggtgga
gaggttgttctaaaagcattggacccacatttccaaatcaatgatccatacagccacgag
atacgagagcttataacttttaccaatctacggataaacttcacacagctgcatacactt
ggagatacacgtttgcggaggagacaggccagagctaatgaaaaatattattacgcattg
tatgaaatggttgttcgtgggagctgcttttgctatgggcatgccagccagtgtattcct
cttgaaaatataagaggtgatgtgtttgaccagcaaggaatggttcacggacggtgtatc
tgtcagcacaatacagatggtgcaaactgcgaaagatgtaaggacttttacaatgattca
ccatggcaaccagcgataggatcagagagagacgaatgcagaaggtgcaactgcaatgga
cattctgaaaaatgccattttgacatggcagtatatttggccagcggagaagtcagtggt
gggatttgtgacgagtgccaacacaatacaatgggtcaaaactgtaaccaatgcaagcct
ttcttctaccaggatcctgggagaatgatttctgatccatacgcatgtgtcgcctgtaac
tgtgatccaggaggatcactaaacaatgggatgtgtgaaagtcacacagacccaagcctt
ggaacagtcgctggacgctgcatttgtaagagaaatgttgaagggacaagatgtgaccag
tgcaaacctggctactttggactaagtgctgttaaccctgaaggatgtgaagagtgtcga
tgtgattcacgtggcagtgtgtcagtacattctgtgtgtgatgctatcagtggggagtgc
cattgccatcgatatgtcactgggaaaaactgtgaacagtgtctgccaagctactggggt
cttggaaacattaactacggttgttccccttgtgactgtgacattggaggggcttatgat
aatttctgttccttgcatgacggacagtgtcgctgtctacccaacattatcaggcgccag
tgtaatgaaccagctccaggctacttctttgctccattggattactatttgtatgaagct
gaacttgcaaaaccaatagggaatagcggttctttggtaggacccacgtctctgccacca
tgtgatgagtatttacgaagacaaggctataattttcgagtggagcatggtacattgata
cttcaaaggattacgaaacgtcatatgcaacatcagaggaagaggcaagtcatgaatcca
gaatcccaggtacagattgtttccagagaatatgttcccggtggacctacaacttggaca
ggtctggggtttgctcgtgttctacgtggaacaggactgcgattcattgttgacaacatt
ccatacccaatggacttcacagcagccattcgctatgagtcagagtcagcaggtgactgg
atggccagtattcaagtttggccaacaaatcaaccaagtaatagccagtgccgcaataac
ctgccctcacgggagcctaatacagttaccttgccagctacctccaggatcacatttctt
catattccaatttgcctggagccctcagtacagtatattgtggagatttacttccattca
ttgcctactccgaacaatcagttcagcgatcacatcttgattgattctctaggtctgatt
ccaatgattaactctctggaggatttcaacagtaaaacagatttggatgagtacagacga
tatcgatgtgtcgatgctgcctatcaagtggtacctcagacaataccagaagtatgtgag
agactcattgccagtatgtctgctcggatccacaatggagctatcccctgttgctgcaat
cctcagggatcaatcagtcgaatatgcagcaagtttggtggccaatgccagtgcaagcct
ggtgtgattggacgatgctgtgattcctgtgcaccaggattttatggatttggtgccaat
agctgttcaccctgttactgtaaccgtcaaggggccatcgattcaatttgtgatcagcga
actggacaatgtcgttgccatagaaataccgttggccatgcctgtgaccgctgccgaccc
ggatattacggattcccaacctgtcgtccatgtcagtgtaatagtcattcggaatcctgt
aatcctcaaacaggaatctgtgtgaactgtagagcattcgccactggaaataactgtgag
cgatgtagtgaaggttacttcggtaatccgagtttaaatgaaccttgtcgaccatgtcag
tgtcctgacattccaaacagtggacgctattttgctcattcatgttacaaagactcgaga
actcaacaattggtttgtaactgccttgaaggccattcaggaagtcgctgtgagagatgt
tctcctggtttctacggtactctgatagggattggagatcactgtttgccttgcagctgc
aatgataacatagacaggagagacccaggagcttgcgatccgcagacgggcaagtgtttg
aaatgcctgcataacacctatggaccaaattgtcagtactgcaagccagggtattatgga
tctgctttgaacaaggactgcaaacaatgtacttgcaatggcattggactcgataggggg
cgctgtgttcccaatagtttgtgtatgtgtgatcaagcaactggtcagtgtccatgctta
ccaaatgtggttgggaacagctgtgtgaaatgtgctcctggtttctggaatctgcgcagt
ggaagaggatgtaagccttgttattgtgaccctcagaactccgtcagctcccaatgtgac
gaggttactggacaatgtcaatgcaaagctggctacagtggaaaaacatgttctgaatgt
caggataattattatggcaacccaagaatacagtgtatctcctgtaactgcagtttggaa
ggaacagaaaggcctgcatgtgacaagacaacaggtgcctgtaaatgccgtgaaggtgta
acagggcaacattgcaacaagtgtgcatggggttactgcaaggagtttccaaaatgcaca
gagtgtcatccttgctttaagctgatagatgaagagatatgttccatcatccgagccact
gaaagtctgatcaacaagaccaacttcgtgcctggacaaactccggggccctcctataat
gaaaggcttaaaaagttaggaaagaaatttgctgcagttgccaacaagttaaatgactca
gttgcttccccggatgcatttgaaaagacaaaggattactttgacaaaatcagggaaatc
aaaatgcagatcaacacacacttgaatatttcaaataacactgagcagcataaccgagat
attgatgatttgaatgaagaaattgacaagctcagtcagaaagtgaatagattcggaaac
gactccaggacaatagctaacgcaagtggtaactttgaagacattaacaaatactatcag
aattccaaaacctcacaacagaaagtgaatgattcagaactggtgctgaacaactcaaat
atgacaagagaaaaggcagctgccttgttaaacaaaacaatgttgatcaatagagatgaa
atccatgcattaaacaacaagactaaactactggagttgagtatcctaaagatttgtgga
ggacaagggaatatatcttgtaatgaaagtcaatgtgatgaagctctatgccatgacagg
tttggaaatcaaagatgcaatgcctcaaactgtactggaattctgaccctggcaaattct
gcatacacacgaaataatgaaacaataaaccagatgaatgatctcttagaaaaattgcag
aatgcaataagcacgattgactctctcagaaacatgacacaggaaactaaggataaggca
aataaattatctgataaggtagctacgtctaaagatgaacttgaaaaggaaaagcaagaa
accaaagccatcattgataaagtgaaagagtttctctcagctgacggtgtttctcctgaa
gatcttgaaaaaattgcaaatcatgttctttccatcaagttacccatcagtcgggaagaa
ctggtgaacaaaagcaaacaaattcagaacattatttctgaaattaaagaccttgagaaa
gaattggaaagaatgaaccggtggtctgaagaagcaaagacacttttgatacgtgcaatg
aaaacagtgaaagtgactgaagagatcccaaatccagaggaactgcaggaggatctggac
aaaattaaagaagcgcaaaaaaatgtcacagatgcaataataggaatccgtgttaatcta
aataattccgatactgcaatttcacagattaaaaagaaaactgagtcaatttttgagact
ctaatgcagttaatgaacaatgtaacaaagctgcaaaatgaagctgaagaagtgaaaaac
aagacggataacaacaagataatggcacaaaaggcaaaggagaaagcgaaccgagcaaaa
gctcacgcagaggaagctgagcaagaatttcaaaaaatgaacgagacttacgtaaaatta
agcaacatcaatattcaaaagattccacctgatggaaaacagaaagcagaacaactgcaa
caagacgctgctgatttagcaaaagacctggaagaaaaactacaaagaattacagccttg
gagaagaagttacaagatggatatcagaaaataaaagagaaagaagattacttgtctgac
cttgaacaaaatgtgaccagcattaaagcatttattgacagcaaggtctctcactatgtt
gactgttttccatag
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