Chiloscyllium plagiosum (whitespotted bambooshark): 122561759
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Entry
122561759 CDS
T08871
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122561759 (pus7)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122561759 (pus7)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122561759 (pus7)
Prokaryotic type
122561759 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
122561759
NCBI-ProteinID:
XP_043569804
LinkDB
All DBs
Position
23:33492012..33551497
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AA seq
730 aa
AA seq
DB search
MHSGRTNKGLHESSRTQGTTGNQNGFSTHVYGSLKDFGTLVFIKIFYYVPLKVHQSTNIW
NHFEKNCSVYIALNKMEVEEANNLAKKHPLLSDEEQTKTEQYKRIKLSEPGISSDQSSIN
KHAEILEGGLQAVPSIPDENAEKEGVEEIDNAVFEEDEEGDGDSFADMMKYGLVEQDVGI
TKFVSTHQGFSGILKERYSDFVVHEINKDGKIVVLDDLSVPPNDEEPSEDIFSILSDEDK
QHLEDLQHFKNKEDSVVIEVVEDTKEKRTIIHQAVKSFFPGLETKTEERDGKKFIVAYHV
AGKTALAKVKAADPRKHSWPKNRGTYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMG
TKDKRAITVQEIAVVKITAERLSHLNKCLMNFKLGNFSYKKYPLKLGELQGNHFTVVLRN
ITGSSEQVEQAMTSLRDVGFINYYGMQRFGTTAVPTYQVGKAILHNKWSEVVDLILKPRP
GAERGYLVKCREEWAKTKDPEAALKKLPVKRCVEGQLLRGLAKYGMKNIASAFGMIPRNN
RLMYIHSYQSYVWNKIVSKRIEEYGLKAVPGDLVLKGVTAVPIEDSDVEKHTIHDIVMPL
PGFDVLYPKHEIGKAYEEMMAADGLDINNMKHKIRDYSLSGAYRKIIIRPQNVTWETLVY
DDNKIPLVHTDLEKLEGTPLPEFSKDGKYKALKMDFSLPPSSYATMAIREVLKMDTSIKN
QTQLNTVWLR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcattctggaaggactaacaagggactgcatgaaagtagtaggacccaaggaactaca
ggaaatcagaatggctttagtacacatgtctatggatccttgaaggattttggaacacta
gtttttataaagatattctactatgtgcccctgaaggtccatcaatcaacaaatatatgg
aatcattttgaaaaaaattgttctgtctacatagccttgaacaaaatggaagtggaggaa
gcaaataatttagcgaagaagcatcctctgctcagtgatgaagaacaaaccaaaactgaa
cagtacaaaaggatcaagctttcagaacctggtatatcttcagaccagtctagtattaat
aagcatgctgaaatacttgaaggtggtttgcaagcagtcccttctataccagatgagaat
gctgagaaagaaggtgtggaagaaatagacaatgctgtgtttgaggaagatgaagaaggt
gatggagacagttttgctgatatgatgaaatatggcttagttgagcaagatgttggaatc
acaaaatttgtcagcacacaccaaggtttctcaggaattctaaaagaaaggtattcagat
tttgttgttcatgaaataaacaaggatggcaaaatagttgttctggatgatttgtctgta
ccacctaatgatgaggaaccttcggaggacattttttccattttgtctgatgaagacaag
cagcatttagaagatcttcaacactttaagaataaggaagactctgttgtaatagaggtt
gttgaagatactaaagaaaaaagaacaattattcatcaggctgtgaaaagtttctttcct
gggctagagactaaaactgaagaaagagatggaaaaaaatttattgtagcctaccatgtt
gctgggaagactgcattggcaaaggtcaaagcagcagatcccagaaagcattcgtggccc
aaaaacagggggacctactgccactttgtgctctataaagaaaacaaggacacaatggat
gcaattaatgtattgtctaaatttctaagagtaaaaccaaatatattttcttacatggga
accaaagataagagagctataacagtacaagaaattgcagttgtaaaaatcacagcagag
agactttctcatcttaacaaatgtttaatgaacttcaagctagggaatttcagttataaa
aaatatcccctgaagttgggtgagttgcaaggaaatcattttacagttgttctgaggaat
atcactggatcaagtgaacaggtagagcaagcaatgacttcactgagggatgttggattt
ataaactattatggaatgcagagatttggaacaacagcagttcctacttatcaagtagga
aaagcaattctgcataacaaatggagtgaagttgtggatctaatcctaaaacctcgacct
ggagcagagagaggttatcttgtgaaatgtagagaagaatgggctaaaaccaaggatcct
gaggctgcactgaaaaagcttccagtgaaaaggtgtgtagaaggacagttactgcgaggg
ctggcaaaatatggaatgaagaacattgcatcagcatttggcatgattccaagaaacaat
cgacttatgtacattcacagttatcagagctatgtgtggaataaaatagtgagcaaaagg
attgaagaatatggacttaaagctgtgccaggagatttggtactgaaaggagtgacagca
gttccaattgaggactctgatgtggagaaacatactatacatgacatagtgatgcccttg
cctggatttgatgttctgtatccaaaacatgaaattggcaaggcttacgaagaaatgatg
gctgcagatggcttagatataaataatatgaaacacaagattagagattattccttatca
ggagcatacaggaagatcattattcgccctcagaatgtcacttgggaaactctagtgtat
gatgataacaaaattccattggttcacactgatctggaaaagctggaaggaacacctttg
cctgaattttctaaagatggtaaatataaagccctgaagatggatttctcacttcctccc
tccagttatgctactatggctattcgagaggtgctcaaaatggacacaagcatcaaaaat
caaactcagctaaacacagtctggttgcgataa
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