Chiloscyllium plagiosum (whitespotted bambooshark): 122561785
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Entry
122561785 CDS
T08871
Symbol
cdhr5-rs
Name
(RefSeq) uncharacterized protein cdhr5-rs isoform X1
KO
K16505
cadherin-related family member 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122561785 (cdhr5-rs)
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Cadherin related
122561785 (cdhr5-rs)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
SIT
TM_ErbB1
DUF6377
TAS2R
Motif
Other DBs
NCBI-GeneID:
122561785
NCBI-ProteinID:
XP_043569876
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All DBs
Position
23:36998237..37053327
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AA seq
1054 aa
AA seq
DB search
MDFNTMLKTHTLIVSLLLTRFIPVSMEGNRCSGGHDLYVDIKENSPNGTVIAKLTINGNL
SSHEISLNLTGTDMEWFQLEEEVVKLNVLPARQLDRELLSTPLLFATITCTDVATSDQIH
YRLMVQVLDENDNPPMFLKESVQQVNISELTQVGNVVFTIKANDRDGDDLIYIIDGATSD
AEFFTINLPSSGKVQLAQQLDFEVKNELELMVCAMEVNTKERYNTTAKININVLDGDDQY
PRFLPCNFLSHGASRICVNPIYTGNVTEAKLPFHALQLSPGSVLAEDGDIGLQSPVIYSI
LEGGDNGRFEINNITGALMMRWPVRSYIQNPSFSLTVMASQVDDSSKYTVTKVLIRVLVQ
NRHRPRFNKIEYKGFVQEQLNPFALVVTYGNKPLLVKAVDQDFKNGRNPKLTYTLTNQSN
HTQLYQVTQEGLLLARTNRLHAHEKYMLQIVGTDNESGDMVSTKVNVEVLHSRQPVPSGL
PKESRMHSSKEMGLLGGIIAILLLLLIVAFILLVYNLRRRQKQHRQTSTVAVERNTNVRL
KWFQLINTSKPEQSCRNLAYINEAFSSCNEESNNGGATYNQAKISHELLDAAPIQEQECT
IKPILTNGKLTSCKFMCVKADVTAEEISTDAGHQYTECNNEEQRVNSNCPIGVNFQLPGK
SGLEERPQWESKKEPLEVIKKTLQEAAGQAETVPEEIKSSVSTEKQDLKAYMTEEQEYLI
SSTGLADLMTTRGKKQSVSEAIQEHPATTSREQGHIICSKKRASVVEIMAGDAISEDTVR
TKNLVALEQPAAEEHPLVETQPVIEVTVEHPVEVLYPASTDHPVKIENTVATMSLASSEY
PVVVQHHVETENPVEMEDLGVTRLQVTRKMTTEYPAATEYSVSEDIVFYCPMTGVTIEVL
EGAEEMEDTATIKEIVETSAVVTKCPVAEDGIEQVMTEGLAIEGQSITQLDAEDPSAEGS
TIKGPEGETPTEGQLEGKGSLSAAGTDLELSEVVSIDSAAKEISLEATRHPEPDMVRDCS
VVPMGSTDTDYSAAVERGDSSVTLGENTTNMVMF
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggattttaacactatgttgaagactcacacgctgattgtaagcttgctactcaccagg
tttataccggtctccatggaaggtaaccggtgttcgggagggcatgacctatacgttgat
attaaagagaacagtccaaatggcacagtcattgcaaagctcaccataaatggcaacctt
tccagccatgagatcagcttgaatctgacaggaacggatatggagtggtttcaattggag
gaggaagttgtcaagctgaatgtgttgcctgccagacagttggatcgagagctactatcc
accccacttctctttgcaacgataacatgtactgatgttgcaacttcagatcagatccac
tacagactaatggtgcaggtacttgatgagaatgacaatccaccaatgttccttaaagaa
agtgttcagcaagtcaacatcagtgagttaacccaagttggcaatgttgtcttcacaata
aaggcaaatgacagggatggagacgacctcatctacatcattgatggagcaacgagtgat
gcagaattcttcacaatcaacttaccgagcagtggaaaggtccagttggcccagcaactg
gactttgaggtgaaaaatgaattggagctgatggtttgtgccatggaagtgaataccaaa
gagagatacaacacaacagcgaaaattaacatcaacgtgttagatggggatgaccagtac
ccaagattccttccctgcaatttcctgtcgcatggagcatccaggatttgtgtcaaccca
atctacacaggaaatgtcacagaggcaaagctaccgtttcacgctctccagctctctccg
ggctccgtattagcagaggatggagacataggacttcaatcaccagttatatactcaatc
cttgaaggtggtgataatggcagatttgaaatcaacaatattactggagcgctaatgatg
aggtggccagtccggagctacatacaaaatccatcattctctcttacagtcatggcctcc
caagtggatgactctagtaaatacacagtgaccaaggtgttgattcgtgtcttggtccag
aatcgtcatcggccacggtttaacaagatcgagtataaaggatttgttcaggagcaactc
aacccctttgccctggtagtgacttatggaaataaacccttattagtgaaagcagtggac
caagatttcaaaaacggcagaaacccgaaacttacctacaccctgacaaatcagtccaac
cacacacagctataccaggtcactcaggaagggcttctacttgctcgaactaatcgattg
catgcacatgaaaagtacatgctgcagattgttggaacagataatgaatcgggcgacatg
gtcagcaccaaggtcaatgttgaggttctgcactcacgtcagccagttccatccggactt
cccaaagaaagcaggatgcacagctctaaagaaatgggattattgggaggaatcattgcc
atattactcctcctccttattgttgcatttatcttacttgtatataacttaaggcgtcga
cagaagcaacatagacaaacgagcacagttgcagtagaacgaaataccaatgtgaggtta
aagtggttccagctgattaacaccagcaaaccagaacaatcctgcaggaatctagcctat
ataaatgaagccttcagtagttgcaatgaggagtcgaacaatggtggtgccacctacaat
caggcaaaaatttcacatgaactgcttgatgctgcaccaattcaagaacaagagtgtacc
atcaaacccatcttgacgaatggaaaacttacttcctgcaagtttatgtgtgttaaagct
gatgtaacggcagaggaaattagcactgatgctggacaccaatatacagaatgtaacaat
gaggagcagagagtaaatagcaattgcccgataggagtaaactttcaattaccaggtaag
tctggcttggaggaaaggccacaatgggaaagtaagaaggagccattggaagtcataaag
aaaactctgcaagaagcagcagggcaggcagagactgtgccagaagaaataaagagctcc
gtgtcaacagaaaagcaagaccttaaagcatatatgacagaagaacaagaatatttaata
tcttcaacaggtcttgcagacctcatgaccacaagaggaaaaaagcaatcggtatctgaa
gcaatacaagaacatccagcaaccacatcaagggaacaagggcacataatatgttccaag
aaaagagcaagtgtagtggaaataatggcaggagatgcaatatcagaagatacagtgagg
acaaaaaacctagtagctctagagcagccagcagcagaagagcatccactagttgaaaca
caacctgtgatagaagtaacagtggagcatccagtggaagtactgtatccagcatctaca
gaccatcctgtaaaaatagaaaatacagtggcaacaatgtctctggcatcctcagagtat
ccagtggtagtacagcatcatgtggaaactgagaatccagtggaaatggaggatctaggg
gttacaaggctgcaagtgacaaggaaaatgacaacagaatatccagcagccacagagtat
tcagtatcagaagacattgttttctactgtccaatgacaggagtaaccatagaggtcttg
gaaggagctgaggaaatggaagacacagcaacaataaaagaaattgtagaaacttcagcg
gtggtcacaaagtgtccagtggcagaagatggtatagagcaagtcatgacagaaggactg
gccattgagggacagtcaatcacacagttggatgcagaagatccatcagcagagggatca
accataaaggggccagagggagaaacacctactgagggtcaactggaaggcaaaggaagc
ctgtcagcagcaggaacagatttagagctctcggaggtagttagcatcgactcagcagca
aaagaaataagtctggaagctacaaggcatcctgaacctgatatggtcagagattgttca
gtggttccaatgggttcaacagacactgattactcagcagctgttgaaagaggagacagt
tctgtaactttaggggaaaacaccacaaatatggtgatgttttag
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