Chiloscyllium plagiosum (whitespotted bambooshark): 122561789
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Entry
122561789 CDS
T08871
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122561789 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122561789 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122561789 (tnpo3)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
122561789 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Importin_rep_3
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
122561789
NCBI-ProteinID:
XP_043569885
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All DBs
Position
23:complement(37233440..37306486)
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AA seq
923 aa
AA seq
DB search
MAGDRPSLTVVYQAVKALYHDPDPAGKERASVWLGEFQRSMYAWEIADQLLQLQQEVELC
YFAAQTMKMKIQASFNELPPETHASLRDSLLTHIQNLKDVSPVIVTQLALAIADLALQMA
SWKGCVQMLTEKYSNDPSSLSFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAYSSSTV
VSLLAACTERSGNEEKTLIKVFRCLGSWFNLGVLDSNFMANNRLLLILFQVLQCDDTSTN
LHEAASDCICSALYAIENVETTLPLALHLFQGVLTLESAYHMAVAREDLDKVLNYCRIFT
ELCETFLETIVQTPGQGLGDLRTLELLLICAGHAQYEVAEISFNFWYRLGEHLYKMNDPS
RHAVFRPYIQRLLHALARHCQLESDHEGIPEDSDDFGEFRMRVSDLVKDVIFLVGSMECF
TQLYSTLKDSGPSWEITEAVLFIMASIAKSVDPDNNPTLAEVLEAVVHLPDTVHMAVRFT
SIELVGELNEVVDRNPRFLDPVLNYLMKGLREKELASASAKAIQNICSSCRDHMTQHFEG
LLEIVRSLETFSLSHEAAIGLLKGTALVLCRLPLEKITECLSELCAVQVLSLKKLLAQEP
ANGLATDPTIWLDRLAVIFRHTNPIVENGQTHPCQKVIHEIWPVLSETLNKHQADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYRVHPHSCFLYLGSILVDEYGMEEGCRQG
LLDMVQALCMPTFQLLEQPNGLRDHPDTVDDLFRLATRFIQRSPTTLLQSQIIIHILNCA
IAAVILDHRDANCSIMKFLRDLIHTGVAKDHEDDFELRKELIKQVMTQHGQQLVNQLLQA
VCFCLPPYTLPDLAEVIWEIMQIDRATFCRWLEVSLKSLPKETAGGAITVTHKQLTDFHK
QVTSADECKKVCWALRDFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctggggacaggccctcgctcaccgtcgtctaccaggccgtcaaggcactttaccat
gacccggacccggccggcaaggagcgcgcttccgtctggctcggcgagttccagagatcg
atgtatgcctgggaaattgctgatcagttgctgcagttgcaacaagaggtggagctctgc
tattttgcagcacagacaatgaagatgaaaattcaggcatcatttaatgaacttccacct
gaaacgcatgcatctctgcgagactcgctgctcacccacattcaaaacttgaaagatgtg
tctcctgtaattgttacacagctggcactggcgattgcagatcttgccttgcaaatggcc
tcgtggaaaggatgtgtgcaaatgctaactgaaaagtatagtaatgacccatcatccctt
tctttcctgttggaaatcctgaccgtccttccagaggaggttcatagtcgctctcttcga
ataggagccaaccgccgcacagaaataatcgaggatctggcgtactcctcgagcactgtg
gtatcactgctggcagcctgtacagaacgtagcggcaatgaggagaagactctgattaag
gtgttccgatgcttggggagttggtttaacttgggtgtgttggacagcaacttcatggca
aataatcgactgctactaatcctctttcaggtcttgcaatgtgatgatacctcaacaaac
ctgcatgaggctgcatctgactgtatctgttcagcactgtatgccattgagaatgtagag
acaaccctacctcttgctctgcacttattccaaggtgttttaactttagaatctgcatat
cacatggctgtagcacgtgaggatctggacaaggttctgaattattgtcggatttttact
gagttatgtgagacatttctagagactattgtacagaccccaggacaagggcttggagac
ctgcggacactggaactgctattgatttgtgcagggcatgcgcaatacgaggtggcagag
attagctttaacttctggtatagattgggcgaacatctctacaaaatgaatgacccatct
cgtcatgctgtctttcgtccatacattcagcgattgcttcatgccctggctcgacactgc
caactagaatcagatcatgaaggaattccagaagactctgatgattttggggagttccgg
atgagggtgtctgatcttgtgaaggatgtgatattcctggttggttcgatggaatgtttc
acgcagctctattccacattgaaagacagtgggccatcctgggagatcactgaagctgtc
cttttcatcatggcttccatagcgaagagtgtagatcctgataataatcctaccttggct
gaagtgcttgaagctgtagttcacctcccagacactgtgcacatggcagtccgattcact
agcattgaactggttggagaactgaatgaagtcgttgatagaaatcccagatttttagat
ccagtgttaaattatttaatgaaaggactacgggagaaagaacttgcatcagcatcagcc
aaagccattcaaaatatctgttcctcctgccgtgatcacatgactcagcactttgagggc
ctcctggaaattgttcgttccctcgagacattcagcctctctcacgaagctgccattggc
ctcttgaaaggcacagcacttgttctttgccggctccctttggagaagatcaccgaatgc
ctcagcgagttgtgcgctgtacaagtgttgtcactgaaaaagctccttgcacaagagcct
gccaatggccttgctacagaccccaccatatggttggatcggttggctgttatttttagg
cacacaaaccctattgttgaaaatggtcagacgcatccatgtcagaaggtgatacatgaa
atctggcctgtcttatctgaaaccttgaacaagcatcaagctgacaatcgaattgtggag
cgctgttgtcgttgtttgcgttttgctgtccgatgtgtagggaaagggtcagctgcatta
cttcagcccttggtcactcagatggtgaatgtgtatcgtgtacatccacattcttgcttc
ctctacctgggcagtatcctggttgatgaatatggaatggaagaaggctgccgacaagga
cttctggacatggtacaggctttgtgcatgccaacatttcaactgctcgaacagccaaat
ggccttcgggatcacccagacacagtggatgatcttttccgtttagcaaccagatttatt
caacggagcccaaccacgcttttgcagagccagatcattattcacatcctgaactgtgcc
attgcagctgtcattcttgaccaccgggatgccaactgcagtatcatgaagttcttgagg
gatcttatccacacaggtgttgccaaagatcacgaggatgactttgaactgcggaaggaa
ctaatcaaacaggtgatgacccaacatggtcaacaactggtcaatcaactgctccaggct
gtgtgcttctgccttcccccgtatactttgccagacctagcagaggttatatgggaaatc
atgcaaatcgacagagcgaccttttgccgatggttggaggtttcactcaagtcattacca
aaagagacagcagggggtgctatcacagtaacacacaagcagctgactgacttccacaag
caagtcaccagtgctgatgaatgtaagaaagtttgctgggctttgagagatttcacacgc
ctcttccgatag
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