Chiloscyllium plagiosum (whitespotted bambooshark): 122561794
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Entry
122561794 CDS
T08871
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122561794
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_1
LRR_9
ig
Ig_2
LRRNT
V-set
Ig_6
LRRCT
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
122561794
NCBI-ProteinID:
XP_043569892
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Position
23:38274296..38276545
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AA seq
632 aa
AA seq
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MCHIMNLLWQLTVHHTWNAALVLLVYLTVRMWSVCEASNREQSCPVICSCSNHFSKVVCT
RRGLKEVPQGIPSNTRYLNLMENNIQLIKADTFRHLYHMEVLQLGRNSIRQIEVGAFNGL
TSLNTLELFENRLTVIPSGAFESFSKLRELWLRNNPIESIPSYAFNRVPSLLRLDLGELR
KLEYILDGAFEGLINLKYLNLGMCNLRDMPNLSPLVRLEELEMSSNHFPAIKPGSFQGLK
SLKKLWLMNSQVNLIERNAFDDLTALVELNLAHNNLTSLPHDLFAPLKYLVELHLHHNPW
NCDCDILWLAWWLREYIPTNSTCCGRCHSPPHMRGRYLTEVDKATLQCSRPVILEPPQNL
NISEGRTAKLKCRTSSMSSVRWLLPNNTVLSHGSTHPRISVFNNGTLYFLHVLITDAGTY
KCMVTNVEGNADASAFLRVSMAEINTSNYTYFSTVTVETTPDTVRTKVPPFLSTPPTYKP
AFISTPTVLLQSTRNPKTVAVIPTLATMDTTRTSLDEVMKTTKIIIGCFVAVTLLAAAML
IVFYKLRKRHQQRSTVAAARTIEIINVGEDITPSEGAVVVPSVHDHMNYNTYKPAHGAHW
TENSLGNSLHTTIPEPFIIQTHTKEKVQETQI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacatcatgaatctcttgtggcagctaactgtgcatcacacctggaatgctgcc
ctggttcttctcgtctacctcacggtacggatgtggagtgtgtgcgaagcgtcaaacaga
gaacagagttgtccagttatctgctcctgcagtaatcacttcagcaaagtcgtctgcact
cgccgtggtctcaaagaggtcccccaagggatcccttctaatacccggtacctcaacctt
atggagaacaatatccagctcattaaggcagacacattccgacacctataccacatggag
gtcttgcaactcggccggaattccatccggcaaatagaggttggtgcatttaatggattg
actagccttaacacactggagttgtttgagaacaggctgactgtgataccaagtggcgca
tttgagtcattttcaaagctgcgtgaattgtggctcaggaacaacccaattgaaagcatt
ccatcatacgcttttaacagggtgccatcactgctgcgcctggacctgggggagcttaga
aaattagagtacatcctggatggtgcttttgagggcttaattaacttaaaataccttaac
ttggggatgtgtaatctgagggatatgccaaatctctcaccactggtgaggctggaggaa
ttggaaatgtctagcaatcacttcccagcaattaaaccaggatcatttcaggggctaaaa
tcactaaaaaagctctggcttatgaactcgcaagtaaatctgattgaacgaaatgccttt
gatgacctcactgcattggtggagctaaatctggcccataacaaccttacttcgctgcca
catgatctgtttgcaccactgaagtaccttgtggagttgcatctacatcataatccatgg
aattgcgactgcgatatcctctggcttgcctggtggctgagggagtacatccccacaaac
tctacttgctgtggccggtgccattccccacctcacatgagggggagatacttaactgaa
gtggacaaggccactttacagtgctcacgaccagtcattctggaaccaccgcaaaatcta
aacatttctgaagggagaacagccaaattgaaatgtcgaacatcttccatgtcatctgtc
aggtggttattaccaaacaacacagtattgagtcatggttcgacacatccccgtatatct
gtatttaacaatggaactctatacttcttgcatgttttaataacagatgctggtacctac
aaatgtatggtcactaatgtggaaggaaatgctgatgcctcagccttcctgagagtaagc
atggcagagatcaacacatcaaattacacctacttttcaacagtgaccgtagaaacgaca
ccggacaccgtcaggactaaagtaccaccatttctgtcgaccccacccacttacaagcca
gcattcatctccactcccacagtgctgttacagagtacaagaaatcccaaaacagtggct
gtgatccccacgttggccaccatggacacgacccgcaccagcctggacgaggttatgaaa
accacgaaaatcatcatcggctgttttgtggcagtgacgctgctggcagccgctatgctc
atagtgttttacaaactccgcaaacggcatcaacaacggagcacggtggcagcagccagg
actatagagatcattaatgtgggtgaggacatcacaccatcagaaggagcagtcgtagtg
ccctcagtccatgaccacatgaactataacacgtacaaaccagcacacggggctcactgg
acagagaacagcctgggtaactcactccacactacaatacctgagccctttattatacaa
acacataccaaggagaaagttcaggagactcagatctga
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