Chiloscyllium plagiosum (whitespotted bambooshark): 122561807
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Entry
122561807 CDS
T08871
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122561807 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cpla04030
]
122561807 (smo)
G protein-coupled receptors [BR:
cpla04030
]
Frizzled / Smoothened family
122561807 (smo)
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Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
122561807
NCBI-ProteinID:
XP_043569921
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Position
23:39301247..39340598
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AA seq
825 aa
AA seq
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MSTGWQSFVKAATVSLLLLWTFLELSGTNQTFPHDRCKKVSDCEPLRYNTCMGSVLPYTH
TSLALAEDSNTQEEAHNNLVLWSGLRNAPGCWSVIQQLLCAVYMPKCENGKVELPGQIMC
QITRSPCAIVERERGWPDFLKCSNDRFPEGCLNEVQNIKFNSSGRCESPLVRTENPKSWY
EDVEGCGIQCQNPLFTDNEHDAMHIYIAVFGSIAILCTFFTLATFVADWKNSNRYPAVIL
FYVNACFFIGSIGWLAQFMDGARKEIVCKADGTMRLGEPTSNETLSCVIIFIIVYYSLMS
GVIWFVMLTYAWHMSFKALGTTYQPLSGKTSYFHLVTWSIPFILTVAILALAQVDGDSVS
GICFVGYKNYHFRAGFVLAPIGLVLLVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINE
TMLRLGIFGFLAFGFVFITFGCHFYDFFNQADWERSFRDYVLCEANVSIAEQTNTPIPEC
SIKNRPSLLVEKINIFAMFGTGIAMSTWVWTKATILIWKRTWFRIIGRSDDEPKRIKKSK
MIAKAFSKRKELLKNPDKELSFSMQTVSHEGPVAGINFDLNEPSADLSSAWAQHVTKMVA
RRGAILPHDISVTPVGTPVPPDENKRNLWIIEAEIPPELQKKAGKKKKKRKKGIRPLGPT
EEMHDMGYCTERASSTVPHLPKLPRQKNLVSKAMEPTDVQDNLPGTLLESGINSGSSNGR
FLIGAFNSSLGYRLNAPLNLIANPLSNDDVLEDQLELPRGDQLWLPQRTCKNPFPYSSAN
VEFGRLPVINIPHMPRSENRRTAIAPVHSRTNLVDTELMDADSDF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggctggcagtcttttgttaaagcggctacagtctccctgcttttactctgg
accttcctggagctgagcggcactaaccaaacgtttccccacgaccgctgcaaaaaagta
tcggactgcgagcccctgagatacaatacatgcatgggttcggttctaccttacacccac
acatcgctcgctctggctgaagactccaacacccaagaagaggctcacaacaatctggtc
ctctggtcaggattgaggaatgctccaggctgttggagtgtgattcaacagcttttgtgt
gctgtctacatgccaaaatgtgaaaatgggaaagtggaactacctggtcagattatgtgt
caaatcaccagaagcccctgtgccattgtggagcgagagagaggctggcctgacttcctg
aagtgttcaaatgatcgatttcctgaaggatgcctgaatgaagttcagaacatcaaattt
aacagctctggtcggtgtgagtcccctctggtacgtacagagaatcccaagagttggtac
gaggatgtggaaggatgtggaatccagtgtcagaacccgctcttcacagacaatgaacat
gatgccatgcacatctatatcgctgtctttggatccattgccattctgtgcacattcttc
acattggctacttttgttgctgactggaagaactctaaccgttaccctgctgtcatcttg
ttttacgtaaatgcctgtttcttcattgggagcattggctggcttgcacaattcatggat
ggagcacggaaagagattgtgtgcaaggcagatgggaccatgcgacttggagagccaacg
tccaatgaaacactctcctgtgttataatattcattatagtctactactctctcatgtct
ggggtgatctggtttgtgatgctgacctacgcttggcacatgtcattcaaggccctcggc
accacctatcagcctctttctggaaagacatcctacttccatctcgtcacttggtcaatc
ccatttatattgactgtcgccatattggctctggcacaggtggatggagactcggtgagt
ggaatctgctttgttggatataagaattatcacttccgggcagggtttgtcctggctcca
attgggcttgttctgctggttggtggctatttccttataagaggtgtcatgactctattt
tcaattaaaagtaaccatcctgggctcctgagtgagaaagcagccagtaaaatcaatgaa
acaatgctgcgtcttggcatttttggattcttggcatttggctttgtcttcatcacattt
ggatgccatttctatgatttctttaaccaggctgactgggagaggagtttccgtgactat
gttctgtgtgaagccaatgtctctattgctgagcaaaccaacactcccattcccgaatgt
agcatcaagaatcgccctagccttctagtggaaaagataaacatatttgccatgtttggg
actggcattgcaatgagtacctgggtctggaccaaagctaccatcttaatatggaaaagg
acatggtttagaattatcggccgaagtgatgatgagccaaaacgaattaagaagagtaaa
atgattgccaaagctttttcaaaacgaaaggagctgttgaaaaatccagacaaggaactg
tcgttcagtatgcagacagtgtctcacgaaggaccagtagctggaatcaacttcgacctg
aatgaaccatctgctgacctctcatctgcctgggctcaacatgtaacaaagatggtggcc
agaaggggagccattttacctcatgacatttcagtcactccagtagggacaccagtgcca
ccagatgagaacaagaggaacctttggatcattgaagctgagattcccccagaactacag
aaaaaagctgggaagaagaagaaaaagagaaagaaaggcattagaccccttgggcctacg
gaggagatgcatgacatgggctattgcacagagagagcgtcgagcactgttccacactta
cccaagttacctaggcaaaaaaacttggtgtcaaaagctatggaaccaactgatgttcag
gataatttaccaggcactctcctggaatccggaatcaactctggatcaagcaatgggagg
tttctcattggagcattcaacagctccttggggtacaggctgaatgcacctctgaatttg
attgcaaaccctctttcaaatgacgatgtcttggaggatcagctggaacttccccgagga
gaccaactctggctcccacagagaacatgtaaaaacccattcccctattcctcagccaat
gttgaatttggaagactccctgtaattaatatccctcacatgccaagatctgaaaacaga
aggactgctattgcacctgtacattccagaacaaatctagtggacacagaattgatggat
gctgactctgatttttga
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