Chiloscyllium plagiosum (whitespotted bambooshark): 122561856
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Entry
122561856 CDS
T08871
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122561856 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122561856 (rbm17)
Spliceosome [BR:
cpla03041
]
Complex A
U2 snRNP components
U2 related factors
122561856 (rbm17)
Complex B
122561856 (rbm17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
122561856
NCBI-ProteinID:
XP_043570075
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Position
23:complement(50722389..50758571)
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AA seq
407 aa
AA seq
DB search
MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKATLTQAKTQRSKQSTVLAPVIDLKRG
SSGDDRQIVDTPPHIASGLKDPVPSGFSTGEVLIPLADEYDPMYPNDYEKVVKRQREDRQ
RQRELERQKEIEEREKRRKERHEQPSGFSRRPDPESDEDDDEREKERRKRSMGGAAIAPP
SSLVEKDKELIPTFQYEDESRSRSAPSKAAIPPPIYEEPERPRSPPGPTNSFIANMGGTV
AHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDSAEKVEMPATTKKSEAN
PLTEILKNPTKVVLLRNMVGAGEVDDDLEGETKEECEKYGKVSKCVIFEIPGAPDDEAVR
IFVEFERVESAIKAVVDLNTRYFGGRVVKACFYNLDKFRQLDLGDLF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacgatgatttgggtgttgagaccagtgactcaaagacggagggctggtca
aaaaatttcaaactccttcagtctcagctgcaggtgaagaaagctacacttacgcaagcg
aagacccagcgctcaaagcagagcacagttttagctccggtaatagacctcaagagaggc
agctctggagatgacaggcagattgttgacacaccaccacatatagcatccggtttaaag
gacccggtaccaagtggattctctacaggagaggttttgatcccactggctgatgagtat
gaccccatgtacccaaacgactatgagaaagttgtgaaacgacaacgtgaggacagacag
cgacagcgtgagctggaacgacagaaagaaattgaagaaagagaaaagcgaaggaaggaa
agacacgaacaacccagtgggttctcgagaagaccagatccagagtctgatgaagatgat
gatgaaagagagaaagaaaggcgaaaacgaagtatgggaggagcagcaattgccccacct
tcatcacttgttgaaaaggacaaagaactcatcccaactttccaatatgaggatgaatcc
agatctcgtagtgcacctagcaaggctgcgattccccctccgatttacgaagaacctgag
agaccacgatccccacctggtcccaccaactctttcattgcaaatatggggggcacagtg
gcacacaaaattatgcagaaatatggcttccgcgaaggacaaggtctggggaaacatgaa
caaggattgagcactgcactgtcagtggagaagacaagcaaacgaggaggaaagattatt
gtcggtgacagtgcagaaaaagtagaaatgccagccactaccaagaaatcagaagcaaac
ccactgacagagatcttgaaaaatcccacaaaagtggtcttattacggaacatggtgggg
gctggagaagtcgatgatgacctggaaggtgaaaccaaggaagagtgtgaaaagtatggg
aaagtgtccaaatgtgtcatattcgagattcctggggcaccagatgatgaggcagtcagg
atatttgtggaatttgagcgggtagagtctgcaattaaagctgttgttgacctgaataca
agatactttggtggcagagtggtgaaggcctgtttctacaacctggataaattccgccag
ctggatcttggtgaccttttctaa
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