Chiloscyllium plagiosum (whitespotted bambooshark): 122562043
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Entry
122562043 CDS
T08871
Symbol
ftr42
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122562043 (ftr42)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122562043 (ftr42)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122562043 (ftr42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-B_box
zf-RING_5
ANCHR-like_BBOX
zf-RING_2
zf-RING_6
zf-Nse
Sina_RING
CC_BshC
Motif
Other DBs
NCBI-GeneID:
122562043
NCBI-ProteinID:
XP_043570428
LinkDB
All DBs
Position
24:18195063..18220880
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AA seq
634 aa
AA seq
DB search
MAAPDSSMLGKQFTCSICLDFFKSPVTLTSCGHNFCKGCLEHFWEMIHIHSCPQCKEIFD
SDLPPQENAALNGLVEKWKEGMIEPQELEGKVGQETEVPEQSCQSEARAKLETSKECEQE
LTCKPLDTETEHKAIENEQSDEIVTDPDEVACDSCIDKKLKAVKSCLTCMVSYCESHLRP
HLENAAFKNHKLIHPMKNIEQGKCCVHEQYLDFFCKNDQCCICTECTVEKHVNHEVISVA
RAKTEKENELRETKINVDKKIKAVENAIEKLQSNISCIFNSVSEVKSNVEKQFKDLTEAV
QVAQREVLGFLDESEQKSLKQASGIRTHLENNSIQLNKTKQQVEALMKLKNRVQFLQEFC
EWKKSKPDDMLPSVYIGLIDKLAGISAAVSESTENIKQLLQTSYKEKLNAYSKEEQLGFK
TTVAVICALKYGRREKQPRTRNDFLKYAATLAFDQNTAHRYLRFINDNLKVSNTSPWLQQ
YPDHPERFEHWRQVLCTESFYMGRCYWEVEIRGEGSHVGMTYKSIDRKGDKSSGCITGND
FSWCIQWTGKEFLVWHGGVEMPGKDEKFSRIGVYLDYQNNILSFYGVSETMTLIHKFESS
FTEPLCPAFYLAKKEASVSLLLLDVEAVQNTKPM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccagactcctcaatgctgggaaaacagttcacttgttcgatctgtttagat
ttcttcaaatctcctgtaacattaacctcttgtggacataacttttgtaaaggatgcctc
gaacacttctgggagatgatccacatccacagttgcccacaatgcaaggaaatatttgat
tcagacctgcctccccaggagaatgccgctttgaatggactggtggaaaaatggaaagaa
gggatgattgaacctcaagagcttgaaggcaaagttggacaagagactgaggttccggaa
caaagctgtcaatctgaagcaagggctaaattggaaacaagtaaggaatgtgagcaagag
ctaacttgtaaaccactagacactgagactgagcataaggcaattgaaaatgaacaaagt
gatgagattgtcactgatcccgatgaagtggcctgcgactcctgcattgataaaaagtta
aaagctgtaaagtcctgcctgacttgcatggtgtcctactgtgaaagtcacctgaggcct
caccttgaaaatgcagcctttaaaaatcataaactgattcacccaatgaaaaacatcgaa
cagggaaaatgctgtgtgcatgagcagtatttagattttttctgtaaaaatgatcagtgc
tgcatctgtacggagtgcacagtggagaaacatgtaaaccacgaggtaatctctgtggca
agggcgaagactgaaaaggagaatgaacttcgagaaaccaagatcaatgttgacaagaaa
attaaggcagtggagaatgctattgagaaacttcagagcaacatttcctgcatctttaat
tcggtatcagaagtgaaatccaatgttgaaaagcagttcaaggacctcacggaggctgtt
caagttgcacagagagaggtgcttggttttttggacgaaagtgaacaaaagtcactgaag
caggccagtgggatccgaactcacctggaaaacaatagcatacagctgaataagaccaag
caacaagtggaagccttgatgaagttgaagaatagggtgcagtttttacaggaattttgt
gaatggaagaaaagcaaacctgatgatatgctgcccagtgtgtacattggcttgatcgac
aaacttgctggaattagtgctgctgtttcagaatcgacagaaaacattaaacaattgcta
cagacttcctacaaagagaagttgaatgcatattcaaaagaagagcaactgggatttaag
acaacagtggctgtgatttgtgctttaaaatatggccgacgtgaaaagcaaccaaggaca
aggaatgattttctaaaatatgctgctactttggcatttgaccagaatacagcccacaga
tatcttcgcttcatcaatgacaatctcaaggtctccaacacttcaccctggctgcaacag
tatcctgatcaccctgagaggttcgaacactggcggcaagtgctgtgcacagagagtttt
tacatgggccgatgttactgggaagtggagatcagaggagaggggagccatgttggcatg
acttacaaaagcattgatagaaaaggagacaaaagtagtggctgcatcacaggcaatgat
ttctcctggtgtatccagtggacaggtaaagaattcttagtctggcatggtggtgtggaa
atgccagggaaggatgagaagttcagcaggataggagtgtacttagattatcaaaacaac
atcctatcattttacggtgttagtgaaactatgaccttgatacacaagtttgaatcttcg
ttcacagaaccattatgtcctgcattttatcttgcaaaaaaggaagcatcagtttctctg
cttttacttgatgtagaagctgtgcagaatacaaaaccgatgtag
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