Chiloscyllium plagiosum (whitespotted bambooshark): 122562063
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Entry
122562063 CDS
T08871
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122562063 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122562063 (nup85)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122562063 (nup85)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122562063 (nup85)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122562063 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF760
Motif
Other DBs
NCBI-GeneID:
122562063
NCBI-ProteinID:
XP_043570471
LinkDB
All DBs
Position
24:complement(22090077..22133881)
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AA seq
733 aa
AA seq
DB search
MHLVRAHARRQRVTCASSRSSLFQLIGGWAGKGAESKYAFPLRWTRDREAPVLNTSVGAR
ARTVGRMRGEGRHWVGGRVKGREGCGEWNIPGVDVGEFVGFEWGPTQMLLYPTWHDHTKH
APDGSRRMQFIQVVYNDKDVYSPILPKLFNESHGIFMTLQKSEHNCTTQKAELVSISRNY
RSVIRAYLEELHRSAGSAYSVDPELSMQFEDQVSILSAMEIIWNLCEILYIEAAQAGSLM
SHLLDWIRLHICQVDAMSDQIMASENPVEHLYYWNVVTGYVLQGRLDEARQLLAKKAATE
PAKSSMYRCMDELMRKMPFFSHGSYQTITEFELKWRYWQEECERCLKEGTFASNDKLLLI
CKILAGDENAVSDKKDLLSTWYHLLVSKLLYCHPTVKPTDLYQYAEICLNNFMSSGSRLE
ALDRILLAALEFNIHQVLKDCSIVLNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLI
LEYASGLFNHNSLWQLAVDYFDHCPQFGRIYLELYIERVPLTTERKALKVLRICEQRQMT
EQVRSICKIMAMKAMRNNRLGSALSWSVRAKDSFFATLISDRLLQDYSVKGCFSDFDLIS
NLGSSMLLSDRLTFLGKYCEFHKLYGEMQFTKAANLLLSLMTARIAPRSFWMTLLLDALP
MMEQKEVIFSSEQTYALMHCLEDVTADETESEREMRAVGGEDEVETTQLGLLRLAFTRNL
AKAIVQEGTHQGS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgtccgcgcgcacgcaaggcggcagcgggtgacgtgcgcgtcctcgcggagc
agtctcttccaactgattggtggatgggctgggaaaggggcagagtccaagtacgcgttc
ccgttaagatggacacgtgaccgcgaggcacccgttctgaatacgtcagtgggtgcgcgt
gcccggacggttggaaggatgagaggggaggggaggcattgggttggaggaagagtaaag
ggaagagaaggatgcggtgagtggaatattccaggagtggacgttggagagtttgtcggg
tttgaatggggccctacgcaaatgttgctatatccaacgtggcatgatcatacaaagcat
gcaccagatggatctcgaagaatgcagttcattcaagttgtctacaacgataaagatgta
tactcgccaattctgccaaaactttttaacgagtcacatggcatcttcatgactcttcag
aaatccgaacacaattgcacaacccagaaagcggagttagtttctattagtaggaactat
cgttcggtgataagagcttacctggaggaactgcatagaagcgcagggtcagcttattct
gtggatccagaattgtcaatgcagtttgaggatcaggtttcaattctatctgcaatggag
ataatctggaatctctgtgagatcctgtacattgaggcagctcaagctggttccctcatg
tcacatcttctggattggatcagactgcatatttgccaagtggatgctatgtctgatcag
atcatggcttctgaaaaccctgtggaacatctgtactactggaatgtggttactggctat
gtgctacaaggccgcttggatgaggctcgacagttgctggctaagaaggctgcgactgaa
cctgcaaaaagctcgatgtacagatgtatggatgaactgatgagaaagatgccctttttc
tctcatggcagttatcaaactataactgagtttgagctgaaatggcgttattggcaagag
gaatgtgagcggtgcttgaaagagggaacttttgcatccaatgacaaactgctgctaatc
tgcaagatcctcgcgggtgatgaaaatgcagtgagtgacaagaaggatctcttgtctacc
tggtaccatctactggtcagcaaactgttgtactgtcatccaactgtaaaacctacagac
ctttatcaatacgctgagatctgtttaaataattttatgtcctctgggagcaggcttgag
gctctcgaccgtatcttgttggcagcgcttgaattcaacatccaccaggtgttgaaagac
tgcagcatcgtcctgaataattggtggtttgtggctcacctgacagacctgttggatcat
tgcaaactcctccaatcccataatcttcattttggttcaaaccttcgtgaattcctcatt
ctggaatatgcctctggactcttcaaccacaacagcctctggcaattggctgtagattat
tttgaccactgtccacaatttggtcgcatttacctggaactttatattgaacgtgtacct
ctgaccactgaacgcaaggcactaaaagtattgagaatatgtgagcagcggcagatgacg
gagcaagtgaggagcatctgtaagatcatggcaatgaaagctatgcgcaacaaccgactg
ggatcagctctgtcgtggagtgtgcgagcaaaagactcattctttgcaaccctcatctca
gacaggttacttcaggattactctgttaaaggatgtttttctgactttgacttgattagc
aacctaggatcttcaatgctgctgagtgatcgactgaccttccttgggaagtattgtgag
tttcacaagctgtatggagagatgcaatttacaaaagctgctaacctactgctttcactg
atgactgcccgcattgctccacgatctttctggatgacattgctcttggacgctcttccc
atgatggagcagaaagaggtgatattttcctcagagcagacgtacgcactcatgcactgt
ctggaggatgtgacagctgatgagactgaaagcgaaagggagatgagagctgtggggggt
gaagatgaggtggagacaacacaactgggcctcctccgattggctttcactcggaatctg
gcaaaagccattgtgcaagagggaacgcaccagggatcctga
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