Chiloscyllium plagiosum (whitespotted bambooshark): 122562073
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Entry
122562073 CDS
T08871
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04020
Calcium signaling pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122562073
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122562073
04082 Neuroactive ligand signaling
122562073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122562073
Ion channels [BR:
cpla04040
]
Ligand-gated channels
Glutamate (ionotropic)
122562073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
bPH_7
DUF63
Motif
Other DBs
NCBI-GeneID:
122562073
NCBI-ProteinID:
XP_043570492
LinkDB
All DBs
Position
24:complement(22740045..22866418)
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AA seq
1346 aa
AA seq
DB search
MEQMLQTILFLSAVESAFTRQPSQPTINVAVVLGGSWYHMEIRGSFNQETFQDLPVQINT
VTVVVNNTNPSSLITHICDVLAKSRIHAVIFEDDIESEAVAQILDFTSAEVSAPIIGMSG
GSTVVLTPKEQHSGFLQLGASMEQQIRVIFKVMEEYDWGSFTIITSYFPGYQEFITHIQL
FIETSYYGWEIEQTLTLEMTKDEDNFKTKRLLQQIDAQVLILYCSREEAENLFELAEQVN
LLGPGYIWILSSIAIGSMERVAKQFPVGLISVMTERWKMSLQQRVRDGVAIIAKGAESFY
KTYGYMPGPSADCRHPARGATRNILYRHMLNISWEGKDFSFNEDGYLVRPSMAVVTLNRS
RFWEMVGRWENGLIRMKYPVWPRYGKFQQPVTDSAHLTVATLEERPFVIVEEADPENGAC
VRNTVPCRKQANLSESIAETYTKLCCKGFCIDILKKLAKTVKFSYDLYLVTNGKHGKKVR
GTWNGMIGEVFYQRADMAIGSLTINEERSEIVSFSVPFVETGISVMVARSNGTVSPSAFL
EPYSPAVWMMMFVMCLTVVALTVCLFEYFSPVGYNRNLMNGKITGGPTFTIGKSVWLLWA
LVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQFIDTVSGLSDKKF
QKPQDHYPPFRFGTVPNGSTERNIKNNYPDMHTHMTKYNQRSVADALDSLKSGKLDAFIY
DAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKNSKWKRAIDLALLQFLGDGETHK
LHTVWLTGICQNEKNEAMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHHVK
KSSKTDFLLAISRGIYSCFSGVQEVSSPLHVASPIVSSSFSQANMKMMLQAAKDLVSSTN
VESSLENATKTIEHWTRAGENLTNRLPKAPSQQIEGSEAMDSQLSVPYISNRHQLCYLPA
TLSPSLASERETRWSGRPIIKYKNRLESKYVASKPFTEIHNPHSMTSNEFPKHSQHTRGT
DMRKDLESPYIPFISNNELHHQDIYNRKYFTRRLSLPCRKLASCSAGHVASQSGTKTVPA
VKSCIGLNEKWPVRNLHHPVSYPNQTNCSSCMRLYSGSQSEELPSLTRRSSYIKATKEPE
ETSRFQGRTVNFEKLGRRGEITDLFSSLNNEFLEPRRDTAKHSSDRREAILGHDKKFLYS
SSPSRPRYSPPARLPSYREACLQNSAALRHASTELHQQSWSHSCPSPSMYVWHRRVGSQH
FNWLIGSGHQSCDRDIVMKYLEKRTPYHDNPAREPTAGRSRMVDHRVTARGCEELEAGRA
GVSCTHLRKSCARFSSLESEETTVAV
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaatgctacagaccatcctcttcctgtctgccgtagaatctgctttcaccaga
caacccagtcaacctaccatcaatgttgctgttgtactcggaggatcttggtaccacatg
gaaatcaggggcagctttaatcaagagaccttccaggacctgcctgtacaaatcaacacc
gtcacagtagtagttaacaataccaatcccagcagcctgatcactcacatctgtgatgtg
ctggccaaatccaggatccatgctgttatttttgaggatgatattgaatctgaggctgtg
gcacaaattctggattttacctctgcagaagtgtcagctccaatcatagggatgagtgga
ggctctactgttgtgctcactccaaaggagcagcattctggatttctacagttgggtgct
tcaatggaacagcagatcagggtcattttcaaagtaatggaagagtatgattgggggagc
tttaccatcattaccagttatttccctggatatcaggaattcatcacccacattcagctt
tttattgaaaccagctattatgggtgggaaattgaacagactcttactcttgaaatgaca
aaagatgaggacaatttcaaaacaaagagacttctgcagcagattgatgcacaggttctg
attctatattgctcaagagaggaggcagaaaatctgtttgaattggctgaacaagttaat
ctccttggcccaggctatatctggatactgtccagtatcgcaataggcagcatggaacga
gtggcgaaacaatttccagtcggattaatcagcgtcatgacagagagatggaagatgagc
ttacagcagcgggtgagggatggagtggcaatcatcgcaaaaggtgcagaaagtttttat
aaaacatacggatacatgccgggaccaagtgctgactgtcggcatccagctcgaggggcc
acaaggaatatactgtacaggcacatgttgaacattagctgggaaggtaaagacttctct
ttcaatgaggatggctatttggtgagaccatcgatggctgtggtcacactgaaccgaagc
agattttgggaaatggttggaagatgggaaaatggcttgataagaatgaaatatccagtg
tggccaagatatggaaaattccagcaacctgtaactgacagtgcccatttaactgttgcc
acattggaggagaggccatttgtgattgtggaagaagcagatcctgaaaatggagcgtgt
gtacggaatactgtcccctgcaggaagcaagcaaacctgagtgaaagcattgcagagacg
tacaccaagctgtgctgtaaaggattttgcatcgacatcctgaagaaactcgcaaaaact
gtcaaattttcctatgacctttacctcgtgaccaatgggaaacacggcaagaaagttcgg
ggaacctggaacggaatgattggagaggttttctaccagagagcagacatggccatcgga
tctctcaccatcaatgaagagcgctcggagattgtgagtttttctgtcccctttgtggaa
acaggaatcagtgtgatggtggccaggagcaatggtactgtctccccatcagcttttctt
gaaccttacagccccgcagtgtggatgatgatgtttgtgatgtgtctgacggtggttgct
ctcacagtctgtctatttgagtacttcagtcccgttggatacaacagaaacctcatgaat
ggcaaaattacaggagggccaacatttaccattgggaaatcagtgtggctcctctgggca
cttgtcttcaacaattctgtccccatcgaaaatcctaaaggaacaacaagcaaaatcatg
gtcttaatctgggctttttttgctgtcatcttcctggcaagttatacagcaaacctggca
gcatttatgattcaagagcagttcattgacactgtctctggtctcagtgacaaaaagttt
cagaagccacaggatcactatccgccgtttcgatttggtacggttcccaatggcagcaca
gagcggaatatcaagaacaattacccagacatgcatactcacatgactaaatataatcaa
cgctctgtggcagatgctcttgacagtttaaaatcagggaagcttgatgcctttatttat
gatgcagctgttcttaattatatggctgggaaggatgagggctgtaaactcgttaccatc
ggaagtggcaaagtatttgcaacgactggttacggaattgctttgcagaaaaactccaaa
tggaagagagccattgacctggccctcttacagttcctgggcgatggagagacacataag
ctgcacactgtgtggttgacaggaatctgtcagaatgagaagaatgaggcaatgagcagc
aaattggacattgataatatggctggtgtcttctacatgctcctggtggctatgggcctc
agtctgctggtcttcgcttgggaacacttggtttattggaagctgagacatcatgtgaag
aaatccagcaagacagattttcttctggcaatcagcaggggaatctacagttgtttcagt
ggtgtacaggaagtctccagcccactccatgtggcctctcccattgtctcctcgagcttt
tctcaggccaatatgaagatgatgttgcaggcggccaaagatttagtctcatccacaaac
gtggaaagttctttggagaacgcaacaaaaacaatagaacattggacacgtgcaggtgaa
aacctcacaaacagacttcctaaagcaccatcacagcagattgaagggtcagaggccatg
gatagccaactttcagttccctatatttctaacagacaccaactttgctaccttccagca
acattatctccatctctggcttctgaacgcgagacaagatggtcaggtcgaccaataatt
aaatataagaacagactagaaagcaaatatgtagcttcaaaaccttttactgagattcac
aaccctcattccatgacatcaaatgagttccctaagcactcccaacataccaggggaact
gatatgagaaaagacttggaatccccgtatattccatttatcagcaataatgaattacat
caccaggatatttataacagaaaatatttcacaagacgactatcgttaccttgtaggaaa
ttggccagttgctctgcagggcatgttgcttctcagagtgggacaaagacagtgcctgca
gtgaaatcttgtattggattgaatgagaaatggcctgtgcgaaacttgcaccatccagtg
tcatatcccaaccagaccaattgtagttcatgtatgagactttattctgggtcacagtca
gaagaactaccctcactgaccagacgatcttcatatattaaagcaacaaaggaaccagag
gaaacctctaggtttcaaggcagaacagtaaactttgaaaagctgggacggcgtggagaa
attactgatctgttctccagcctgaacaatgaatttctggaaccaagaagggacactgcc
aagcattcctcagatcggagagaagcaatcctgggtcatgacaagaagttcttgtattcc
agctcaccaagtagacccaggtattctccacctgccagacttccctcatacagagaggcc
tgcctgcaaaactcagctgctctgagacatgcctccacagaactacaccaacagtcgtgg
tcacattcctgtcctagtccctccatgtacgtctggcatcgccgtgtgggctcccagcat
ttcaattggttgattggatcaggacaccaatcctgtgacagagacattgtgatgaagtac
ttagaaaaaaggactccataccatgacaatcctgcgagggagcccacggctggaaggagc
agaatggtcgaccatagggtgacagctagaggatgcgaggagctggaggctggaagagca
ggagtcagttgcactcatttgagaaaatcgtgtgcaaggttttccagccttgaatctgag
gaaaccacggtggcagtctga
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