Chiloscyllium plagiosum (whitespotted bambooshark): 122562107
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Entry
122562107 CDS
T08871
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122562107
03036 Chromosome and associated proteins [BR:
cpla03036
]
122562107
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122562107
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122562107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4718
Motif
Other DBs
NCBI-GeneID:
122562107
NCBI-ProteinID:
XP_043570563
LinkDB
All DBs
Position
24:complement(26405072..26466083)
Genome browser
AA seq
1043 aa
AA seq
DB search
MEEKKKKKQEEKKKKEAAQKKAAEHKTKVPEPTKTSQSQPQPANSCNSTSTTTITNSSGN
NGKRASINCQQQALSRYPPREVPPRFRHQEQKQLLKRGQPLPPGTVISNSLAQVTGQAAA
NPSQHSVQQASGGQQQLQHPSKGQTDLSHSGLGTQYENSHWGQPPFRSEPNSIWDKVIID
GSDKEAWPSISGNETETASECTDTDSASNCGSDNNSMATGSAPGNFNGQNKNCNNGGNGA
LVQSSSNQSAIGCGANGGNGNSSRVWAVAPGSAPGVGHCSAPSGNGKIDSIVSVNPNCWG
TSTPTAGINLNLNPNANPAAWPVVGQEIQGTVGGGSTSNICSPSNPIDQNYGNPNNGPAG
TLNTWGNLLQPESTDTQTSTSQNVSFSIQPQNLNTDGPNNTNPINSSPNPINAMQANGLP
NVSVPGGWAMTVGMGTINPSHLQNLSGGGGSSAVSQLSGRNGEGMNSPSCNSVWGVPHTN
PTTTNSNSAFSQGNGDTVNSALSLSAKQTLANNSNNAVQKDVGNNAWDSGPPTSPRVLPW
TRAGTIGGLHSGPSSIGAWGNTPSNRNTSNGVNGEWGKLSNQHSSNEANGNGKGWEGLCV
NSQTPALQQGNEQINSLAKPSDSGTTGSEGSNESAGSQHEGSTSRSGGRHSSSRRKADKG
MNEQQGLVQSVMSKPDHDPRVLCNSGWGQTPVKQNISWEIQESPRSERKNDNGTEAWGSA
AAQSSNSGARSDGSSISSTNTSLVSGWGNLPPTVMSDNAGWGDKVSNSQGGWGDSANSTA
AAAKSGHAWGGVSNQEEKPPSWADSQKPKSQNWGEGQKTNQGWTSGGVGVVGSGGGDWTD
TAAGPLSEAKKNGSSWENENNHTGPNWNETTRSQASGWNSGTNSKSSSNAGWGEPSKSNA
PQNWGNKLQDNNLSNWGGAASVKQSSSGWVGGSLPTKQKDSEPTGWEEPSPPSIRRKIEI
DDGTSAWGDPTNYKKTVNMWDRNNPVNQSSSNAVAEQPPQPHQSSATQNRSPLLGPGRIH
YHFNFLLQTCNYVDICDGSLIFS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaagaagagaagaaaaagaaggaagctgctcaaaaa
aaggctgctgaacataaaaccaaagtgccagaacctaccaagaccagtcaaagccagcca
cagcctgccaattcctgcaacagcacttccacgaccaccattactaacagtagtggaaac
aatggcaagcgagcttctatcaattgtcagcaacaggccttgtcccgctacccacctcgc
gaagtgccgccacgcttccggcatcaagaacagaaacagctattgaaaaggggtcagcca
ctaccacctgggactgtcatcagcaatagtttagcacaagttacagggcaagcggcagca
aatccttctcagcacagtgttcaacaggcatcaggtggacaacagcaactccagcatccc
agcaaaggacagacagatcttagccacagtggtctgggaacgcaatatgaaaattcccac
tggggacagcccccctttcggagtgaaccaaacagcatctgggataaagtgataatagac
ggaagtgacaaagaggcttggccttccatttctggtaacgagactgaaactgcctcagaa
tgcacagacactgactctgcctcaaattgtggctcagataataatagcatggctacaggg
agtgcaccaggcaacttcaatggacaaaacaaaaattgcaataatggtggcaatggagca
cttgtccaaagcagttcaaaccagagtgccattggatgcggagcaaatggcggaaatgga
aattcatccagggtgtgggctgttgccccagggtctgcccctggtgtagggcactgctct
gctcccagtggaaatggaaagattgatagtatcgtaagtgtaaatccaaactgttggggc
acttctacacctactgctggtattaatctgaatcttaatcccaatgccaatccagctgct
tggcctgtagttggccaggaaattcaaggaactgttggaggaggaagcacttcaaatatt
tgtagtccaagtaatcccattgatcagaattatggtaaccctaataatggtccagcaggt
acattgaatacctggggaaatttgctgcagccagagagcacagatacacaaacgtccact
tcacagaatgtgtctttcagcatacaacctcagaaccttaacactgatggaccaaataac
actaaccccataaactcttcaccaaatcctatcaatgcaatgcaagcaaatggattgccc
aacgtttctgtaccaggaggctgggcaatgacagtaggcatgggtacaataaacccatct
catcttcaaaacctttctggtggtggtgggtcatctgcagtttctcaactcagcgggcgc
aatggcgaaggaatgaacagtccttcatgcaactcagtgtggggagtgccacatactaat
cctacaaccaccaacagtaactctgcatttagtcaggggaatggagacactgtgaattct
gcattaagtttaagtgctaaacagacattagcaaacaattccaataacgctgtgcaaaag
gatgttggaaacaatgcttgggactccggtcccccgaccagtcctagagtactgccatgg
acaagggctggtaccattgggggcttgcactctggtcccagtagcattggagcttggggt
aacacaccatctaacaggaacactagcaatggtgtaaatggagaatggggcaaactctct
aaccagcattccagtaatgaagcaaatggaaatgggaaaggatgggagggtctttgtgtt
aacagccaaacacctgctttgcagcaaggtaatgaacaaattaactctttggccaaacct
tctgattcaggtaccactggtagtgagggaagtaatgaaagtgctggcagccaacatgaa
ggaagcaccagcagaagtggaggaaggcatagtagtagccgacgaaaggctgataaaggg
atgaatgaacagcaagggctggtccagagtgttatgtcaaagccagatcatgaccctaga
gtcttgtgtaattctggatggggacagacaccagtaaagcaaaatatttcctgggaaatt
caagaatcccctaggtctgagcgaaaaaatgacaatggaactgaggcctggggttctgct
gctgcccagtcttcaaactcaggggcgagaagtgatgggtccagcataagcagtacgaat
acctctttagtatctggttggggaaatcttccaccaacagttatgtctgataacgcaggt
tggggagacaaagtgtctaatagccaggggggatggggagattctgctaattctactgct
gctgctgctaaaagtggccatgcctggggtggggtttctaatcaggaggagaaaccacca
tcctgggcagactctcagaaacccaagtctcaaaattggggtgaaggacagaaaaccaat
caaggatggacatcaggaggagtgggagtagtagggagtggtggaggagattggactgat
actgctgcaggacctttaagtgaggcaaaaaaaaatggatctagttgggagaatgaaaac
aaccatactggacccaattggaatgagacaaccagatcacaggctagtggatggaatagc
ggtaccaacagcaaatcaagttcaaatgcaggctggggagagccttcaaagtcaaatgca
ccacagaactggggaaataaacttcaggataataatcttagcaactggggaggagctgct
tctgttaaacagtctagttcgggttgggttggtggatctttgcctacaaaacagaaggac
agtgaacccactggctgggaagaaccttccccaccatctattcgccgcaaaatagagatt
gatgatggtacctctgcttggggagacccaaccaattataagaagactgtaaacatgtgg
gatagaaacaatcctgtgaatcaaagtagtagcaacgctgtggctgaacaaccacctcag
ccccatcagtcaagtgccacgcaaaaccggtcccccctacttggtccaggtaggattcac
taccatttcaattttcttttacaaacatgtaattatgttgatatatgtgatggaagtctg
atattttcatga
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