Chiloscyllium plagiosum (whitespotted bambooshark): 122562108
Help
Entry
122562108 CDS
T08871
Symbol
tnrc6c1
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122562108 (tnrc6c1)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122562108 (tnrc6c1)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122562108 (tnrc6c1)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122562108 (tnrc6c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
122562108
NCBI-ProteinID:
XP_043570565
LinkDB
All DBs
Position
24:26508409..26583826
Genome browser
AA seq
963 aa
AA seq
DB search
MEEPFEQYTVNLDSYGEVFNVFPGWGETLSVPTKTDNSWGEPPLPSTTVDNGTSAWGKPP
NGSSSWADNTAESTGNFGRGNASAAVPTMCKPASKSMQEGWVSGGDEIGLTSSHHPNWEE
DDGEMGMWNNAASQESNSSCNSSGWGNANKKVHPKGMKASNKQEETWLMNRLIKQLTDMG
FPREPAEEALKSNNLNLDQAMGTLLEKKVEMDKRGMGMSDYNGIVSKPLGCRPPSIPKES
SMDRPTFFDKLTLSFSNQDGGLVEESPTSPFLPSPSLKLALSNSAHPNQALGAIASGLGM
QNLNSSRQSGNLGMFGNSGAAQARTMQQQQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQL
LQFAAKNMGLNPALLASPINPQHMTMLNQLYQLQLAYQRLLFQQQMLQAQRNVSGTIRQQ
EQQVARTINNMQQQIQQHQRQLTQALLMKQQPPHPPLHPSAGKVTIDNLSHHPSPSLSDL
QTKEQQTSPNSFPAYSLAGLIPNMNVSNMELSGGISMKDSAQAQSRLRQWTHPNSIENLS
SNSLPLDQSQSKHGAIPGGLNIGPTSKPSLEDSYSPYDLITSSESPASPPVPVSDSWTRA
KSPADKISNGSNINWPPEFRPGEPWKGLQNIDPETDPNVTPGSVPSGPSINTTIRDVDRY
LLRDRSGGSSPTSSQNATLPSSSAWSFSASGYTSSFSSSTSAPNTAAKLTDKSTWSSGPI
AQTQPSLSHELWKVPLGSKNTRPPPGLTNTKPSPSWGVSSLGLVSSWPSSYSSNSAWSTD
SSGRNNSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQK
SLHMCVLGNTTILAEFASDEEVNRFFAQGQTLTQTSSWQSNTGTNQSRLGSSTNSHGLVR
NDLGHWNTTSLSGKGANDLLWSGVPQYSSSLWGPPNSDDTRVIGSPTPINTLLPGDLLSG
ESM
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccttttgaacaatacacggtcaatttggattcatatggtgaagtctttaat
gttttcccaggctggggagaaacactcagcgttcctacaaagactgacaattcttggggt
gagccgccacttccatctaccacggtcgataatggaacttcagcatggggcaaacctccc
aatggcagctcaagttgggcagataatactgcagagtcaacggggaattttggtagaggg
aatgcttcagctgctgtcccgacaatgtgcaaaccagcctccaaatctatgcaagaaggt
tgggtcagcggtggagatgaaataggcctgactagtagccatcatcctaactgggaagag
gacgatggagagatgggaatgtggaataacgcggcttctcaggagagcaactcttcctgc
aattcatcaggctgggggaatgccaacaagaaagtgcatccaaagggcatgaaagcatca
aataaacaagaggagacttggcttatgaaccgcctgattaaacagttgactgatatgggc
ttccctagggaaccagcagaagaggctctgaaaagtaataacctgaatttagatcaagct
atgggtacactattagaaaaaaaagtggagatggacaaacgtggaatgggaatgtcagat
tacaatggaatagtttctaaaccacttggctgccgaccaccttctatccccaaagagtct
tccatggatcggcccaccttttttgacaagctcaccctatccttctctaatcaggatggc
ggcctagtggaagagtcccctacttcaccatttttgccttcaccaagcctgaagcttgcc
ctttcaaatagtgcacaccctaatcaggcccttggtgccattgcctcggggctgggcatg
caaaacttgaattcttctagacagagtggcaatctaggtatgtttggcaatagtggagca
gcacaagccaggaccatgcagcagcaacagcagccgccagtgcaacctcttaactcatcc
cagcctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagctc
ttgcagtttgcagcaaaaaacatgggtctcaaccctgcactattagcctcgccaattaat
cctcaacatatgactatgttaaaccaactctatcagctgcagctggcctaccagcgttta
ctcttccagcagcagatgttacaggcccaacgtaatgtttctggaaccattcgacaacaa
gagcagcaagttgcacgtacaatcaacaacatgcagcagcagatccaacaacaccagcgg
cagctgacccaggccttgcttatgaaacagcaacctccacatccaccattgcacccatct
gcaggcaaagtaaccattgataatctgagtcatcacccatctcccagcctttcagacctg
cagaccaaagagcagcaaacatcacccaattctttccctgcatattccttggctggattg
atcccgaatatgaatgtaagcaacatggagctaagtggtggtatatccatgaaggattca
gctcaagctcaatctcgattgaggcagtggacccacccaaactcgatagaaaatttaagc
agtaattctttaccgctggaccagagccagagcaagcatggtgctatccctggaggtctc
aatattggtccaacaagcaagccctcccttgaggactcctacagtccatatgatctgata
accagcagtgagtcaccagccagtcctccggtaccagtcagtgatagctggacacgtgcc
aaatcccctgccgataagatctcaaatggctccaacattaactggccaccagagtttcgt
cctggggagccatggaaaggactacagaatatcgaccctgagactgatcctaatgttaca
cctggaagtgtccccagtggaccttccattaatactactatccgggatgtggatcgttac
ctgctcagggacaggagtggagggtcatccccaacatcatctcagaacgccacgctgcct
tcatctagtgcctggtccttcagtgcctctggctatactagctctttcagcagctctaca
tctgcacctaatactgcagctaaactgacagataaatccacttggtcatctggacccatt
gctcaaactcaaccatctctatcgcatgaattatggaaagtgccgctaggatccaaaaac
actaggccaccaccaggcctgacaaacaccaagccatcaccatcctggggtgtcagttca
ctcggacttgtctcaagctggccaagctcttattcctccaattctgcttggagtactgac
agctctggaagaaacaatagctggctggttctccgaaacctcacaccccagatcgatggt
tcgactttgcggactttatgcatgcaacatggtccattgataacattccatctgaacctg
acccaaggaaatgctgtggttcgctacagttccaaggaagaagcagctaaggcccagaaa
tctctgcacatgtgcgttctgggaaacactaccatcctcgctgaatttgctagtgacgag
gaagttaaccgtttctttgcacaaggtcaaacactgacacagacctctagctggcagtct
aacacaggaaccaatcagagccgacttgggtcaagcaccaactctcacggattggtccgc
aatgacctgggtcactggaatactacaagcctgagtgggaaaggagcaaatgaccttcta
tggagtggtgtcccccaatactccagcagcctctgggggcctccaaacagtgatgatacc
agagtaattggcagccctacgcctataaacaccttgctccctggtgaccttctcagtgga
gaatccatgtag
DBGET
integrated database retrieval system
