KEGG T08871: 122562155

Chiloscyllium plagiosum (whitespotted bambooshark): 122562155

Entry

122562155         CDS       T08871

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like isoform X1

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

cpla Chiloscyllium plagiosum (whitespotted bambooshark)

Pathway

cpla03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:cpla00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122562155
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpla03021]
    122562155
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122562155
Transcription machinery [BR:cpla03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     122562155
Messenger RNA biogenesis [BR:cpla03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122562155

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_4 zf-CCCH_2 zf-C3H1

Other DBs

NCBI-GeneID:

122562155

NCBI-ProteinID:

XP_043570690

LinkDB

Position

24:34294296..34310479

AA seq 203 aa
MQELVAGLQMMRFDFEIVLEQQRGIMDLPFSGMDRSSSAVCELFIKGKCLKEQMCPFRHT
CGDKNVVCKHWLRSLCKKGDQCEFLHEYDETKMPRCYFYSKYGECNKQECPFLHINSRMQ
IPDCPWYDRGFCKYGPLCKNKHTRKIICENYLAGYCPEGTACKFSQKCLRSHFSQRTALR
RQGSKEAESVNKNASSAGRRDTT

NT seq 612 nt +upstreamnt +downstreamnt
atgcaagagttggtagctggtttacagatgatgagatttgattttgaaattgttctggag
caacaaagaggaattatggatttgccattttctggcatggatagatctagttcagctgtt
tgtgagcttttcattaaaggtaaatgcttaaaagaacaaatgtgcccatttcgacacacg
tgtggtgacaagaatgtcgtatgcaaacactggctccgaagcctgtgtaaaaaaggagac
cagtgtgagtttttgcatgagtatgatgagaccaagatgccacgatgctacttctattca
aaatatggtgaatgcaataagcaagagtgtcctttcctacacatcaattcgcggatgcaa
attccagactgtccctggtatgaccgaggattctgtaaatatggcccactgtgcaaaaac
aaacacaccaggaagataatctgtgagaattatctggctggttactgccctgaaggaaca
gcatgtaaattttcacagaaatgtctgagatcccacttttcacaaaggacagcactgcgg
agacaagggtctaaggaggctgagtctgtcaacaaaaatgcttcaagtgcagggagaagg
gacaccacatga

DBGET integrated database retrieval system