Chiloscyllium plagiosum (whitespotted bambooshark): 122562200
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Entry
122562200 CDS
T08871
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122562200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122562200
03037 Cilium and associated proteins [BR:
cpla03037
]
122562200
Transporters [BR:
cpla02000
]
Other transporters
Pores ion channels [TC:
1
]
122562200
Cilium and associated proteins [BR:
cpla03037
]
Other cilia and associated proteins
Stereociliary proteins
122562200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
RSN1_7TM
Telomerase_RBD
PASD1_N
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122562200
NCBI-ProteinID:
XP_043570808
LinkDB
All DBs
Position
24:37932274..37994524
Genome browser
AA seq
767 aa
AA seq
DB search
MEQVTVYSADIDSDQNSISCTSLQPDQETNMSREVPSYLAEGGGRRRKCTTSKSEQHSSV
WCSGNEMSNLLSVFEEMQLSESRRPLRELPINLTEKRKVREKRKCDTGSLSNWGSWKQNR
QNSLTRLKEEAIGVISWLELWRSSLSEIEGRYGTGIQSYFTFLRFLVFLNFSAFLLVGGF
VLLPSIYINTMKLNLTTAEHLRNSEYASSLAPECFKYNPYPQGLVRFYAYILDLFSGTGF
MELSYMFYGYYKSDVYQDVNYKLPLAYLLTMFLYFLLCFSWIIGRIVNGFKQECMHEKNY
STRHSTKIFTLWDFCIKETIMATLKKQSIVNDLKIDLQEQTCRRRKAERSTEDRLFLYFI
RFVLNLFIMILLTGAFYCIYQATTTSQQFQRRGSENKEMYFVIEFFMEYLPPIVISISNI
LLPFLFRIIVRYEEYPPNTEINLILIRSVFLRLTNLSMLVFSLWQHITCSDSESKQDCEA
CGHSIHYPCWETKIGQEMYKLMLFDFLSCIAVTFCVELPRKFIVEHAPFEITKMLKKQQF
LIPENVLDIVDGQTIVWIGMFYSPLLPLLNIVKYFIIFYVKKHSLYNYCRPGKRLFRASS
SKIFFQLVLLFGLATAIVPVSVNIATVHPSMSCGPFRHYESAWLIIPATVSTFPSEVQRF
LKYTISEPFILLVITILCMILTTLVSLVQINRSTITQLKKHLILTGKDKRYLVKKLSSRS
QHLQHGPFRDSSSESDTLSRAGLEIFNNRTLSSSISVNSLFQENQHN
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagtgactgtctattcagcagatatagattcagatcagaactcaatatcgtgt
acttctctgcaacctgaccaagaaactaacatgtcccgggaagtgccaagttacctggca
gagggaggaggaagaagaagaaaatgcacaacttccaaaagtgaacagcattcttcagtt
tggtgctcaggaaatgagatgtcaaatttgctgtctgtgtttgaagagatgcagctatct
gaaagtagacgacctctgagagagcttcctattaatttgacagagaaaagaaaagtgaga
gagaagagaaaatgtgacactggatctctcagcaactgggggagctggaagcaaaaccga
cagaattcattgacaaggctcaaggaagaagcaataggtgtcatctcctggttagaactg
tggagaagctctctgagtgaaatagaaggtcgatatggcactggcatccagtcatatttc
acctttctacgttttttggtcttcctgaatttttctgcctttcttctggttggtggattt
gtgctcctcccatccatctacatcaacacaatgaaactcaacctgacaactgcagaacac
ctgaggaacagtgagtatgcttcctctttagcgcctgaatgtttcaagtacaatccatat
cctcagggcttggttcgtttttatgcgtacatcttggatctgttctctggaacgggattt
atggaactctcctacatgttctatgggtattataaatccgatgtataccaggatgttaac
tataagcttcctctagcctacctgctgaccatgttcctctactttctactttgcttcagc
tggattattggaaggatagtgaatggatttaaacaggaatgcatgcatgagaagaattac
agcaccaggcacagtaccaaaattttcactctctgggacttttgtatcaaggaaaccatt
atggccacacttaagaaacagagcattgtgaatgatttgaagattgatttacaagaacaa
acgtgcaggaggagaaaagctgagcgaagcaccgaggacagattgttcctctacttcatc
cgttttgtgcttaacttgttcatcatgattttgttgactggagctttttactgcatttat
caagcaaccacaacatcccagcagttccagcggagggggagtgaaaacaaggaaatgtat
tttgtcattgaattcttcatggaatatctcccacccattgtcatttccattagtaatatt
ctcctgccatttttatttcggataattgtccgatatgaagaatatccaccaaacactgaa
atcaatttgatattaatcagaagtgtattcttaagactaaccaatctgagcatgctggta
ttctcgctgtggcaacatatcacctgctctgacagtgaaagtaaacaggattgtgaagcc
tgtggtcacagcattcactatccgtgttgggagacaaagattggacaggaaatgtacaag
ctaatgctgtttgactttctgtcttgcattgctgtcaccttttgtgtggaacttccaaga
aaattcatcgttgagcatgctccgtttgagataactaaaatgttgaagaagcagcaattt
ctgattccagagaatgttttggatatcgttgatggacaaactatcgtctggattggaatg
ttttactctccattactgccacttctcaacatcgtcaagtatttcatcatcttctatgtg
aaaaagcattctttgtacaactactgtcgtcctggcaaaagactgttccgagcctccagc
tctaagattttctttcagttggtattgctgtttggactggctacagcaattgttcccgtc
agtgtcaatatagctacggtccatccatccatgtcctgtggtccatttcgacactatgaa
tcagcttggctcattattcctgcaacagtatcaacgtttccgtcagaagtgcagagattt
ttgaagtacactatatcagagccctttatcctattagtgatcaccattttatgtatgata
ttgacaactttggtttctttggttcaaattaacagaagcacaattactcaactgaaaaag
catttaatcttgacaggaaaggataaacgatatttggtaaaaaagctatcttcacgttct
cagcatctacaacatggtccttttcgagacagttcttctgaaagtgacaccctatcaaga
gctggacttgagattttcaacaacagaactctttcaagcagcatatccgttaattctctg
tttcaagagaaccaacacaattga
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