Chiloscyllium plagiosum (whitespotted bambooshark): 122562259
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Entry
122562259 CDS
T08871
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03015
mRNA surveillance pathway
cpla03040
Spliceosome
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122562259 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
122562259 (alyref)
03015 mRNA surveillance pathway
122562259 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122562259 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122562259 (alyref)
03041 Spliceosome [BR:
cpla03041
]
122562259 (alyref)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122562259 (alyref)
TREX complex
122562259 (alyref)
Spliceosome [BR:
cpla03041
]
Complex C
Other components
EJC/TREX
122562259 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122562259 (alyref)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
F07F6_N
Motif
Other DBs
NCBI-GeneID:
122562259
NCBI-ProteinID:
XP_043570955
LinkDB
All DBs
Position
24
Genome browser
AA seq
265 aa
AA seq
DB search
MGDKLDMSLDDIIKLNRQKSPGGRGGRGARGGGGGGGMGRGAGRGGGGGLAGRGAAGGRG
GGGVGAGALAVGLMRNRQSAIRGRNRPAPYSRPKQLPDKWQHDLFDSGFGASGGVETGGK
LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN
GVPLDGRPMNIQLVTSQIDAQRRPLVSGNRGLNRSRGSAFGGGSRRSRGSNRGGRGRGGR
NPRQQLSAEELDAQLDAYNARMDTS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaactcgacatgtccctggacgatatcatcaaactgaaccgacagaaaagc
ccgggcggccgcggaggcagaggtgcccgcggcggaggtggaggaggcggcatgggccgc
ggagcaggccgaggcggcgggggcggcctagccggccgaggagcagcgggaggccgcggt
ggcggtggagttggggcgggagccctggctgtaggcctcatgcgcaacagacagagtgca
atccggggaagaaaccgaccggctccgtacagcaggccgaaacaactcccagacaagtgg
cagcatgacctttttgacagtggttttggcgctagcggcggtgttgaaactggcggaaaa
ctcttggtgtccaacttagactttggtgtgtctgatgcagatattcaggaactttttgct
gaatttgggacattgaagaaagcagctgtgcattatgatagatcgggtcgcagcctaggg
acggcagatgtacactttgagcgaaaagcagatgctctgaaagctatgaagcagtataat
ggagtacctttagatggacgaccaatgaacattcaactggttacctcacaaattgatgcc
caaaggagaccacttgtcagtggaaacagaggattaaaccgatctcgtggtagtgctttt
ggaggtggaagcaggcgatccagaggcagcaacagaggtgggagaggtcgtgggggaagg
aatccaaggcagcagctatcagcagaagaactggatgcccaattggatgcttataatgcc
aggatggacacaagttaa
DBGET
integrated database retrieval system
