Chiloscyllium plagiosum (whitespotted bambooshark): 122562260
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Entry
122562260 CDS
T08871
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04148
Efferocytosis
cpla04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122562260
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122562260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cpla04090
]
122562260
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122562260
04091 Lectins [BR:
cpla04091
]
122562260
CD molecules [BR:
cpla04090
]
Proteins
122562260
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
122562260
Lectins [BR:
cpla04091
]
I-type lectins (Siglecs)
122562260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
Ig_C17orf99
I-set
Zwei_Ig_N
V-set
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Ig_5
PPP4R2
DUF3858
Motif
Other DBs
NCBI-GeneID:
122562260
NCBI-ProteinID:
XP_043570958
LinkDB
All DBs
Position
24
Genome browser
AA seq
787 aa
AA seq
DB search
MLKVIFPILSFLLLEASKTESENGVIINSVKLKYNPADAGGIKEGSNITLTCSVDILTPS
GQSPQISYLFYKGQTQDVLLKIVTIQAQESQYLIQSARPSHSGYYSCEVAAGSQREESAS
TFITVTGNLQTPVLTVHPIEVILGDLTELCCTSEEIPPLTFIFYTYKNGLNPVRLHENSS
KNKTVTHQLRVTTDTEKNYSCTIEVPAARSVSKHSEVVQLSVQNPFSDPMFEIEPSNEIF
EGDKLTIKCRVTHLLPHVKPQLIIMKDTTPISTGNTSSVVFSKTANATDTGKYGCMARWN
SVSQAIRRQVTVAVPVSIPTLMSTPIGGNVVEDGSLDLSCAVLGGSYPITYKFYQDTSEI
PLHQITLNATTAVHHIVSVKNGHSGKYSCEVSNSANQITRTKKSQYVTIIVRVPVSNPTI
KCNSLKDVYKTGEWVILLCQSTNGTVPITYSLFSNKRLIYLISRSDREPATFKVLLNETK
DGGEYKCKAENEIPNLSKYSKGINITIKVPVSKPLIYPLLNSTKVKLGETVTLHCVTSTG
TLPITYTLYRNQSSLQSATTMQAIPAGFNITVDSVEHSGVYSCKAENQISSEHSNGLSFR
ILRGGFLWWIYIIIVVISLMIIGLAILIAQHCKQWCKNNEGINQEDESSKPSQRGPLQHN
QGSLKKSMEVIYSKIGNITHPKLNQPDSDMLIEQQEADSDRNHEGDYTNIMSYQGNVTED
DSESDCEADYTNVTSKRKAASADSDTSSDETNHVLYTQLDLAALQNNSTPQPQGPTIYAS
IALDKLR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcatctttccaattctgtcatttttactacttgaagccagtaaaacagag
tcagaaaatggtgtgattataaacagtgtaaaactaaaatataatcctgcagatgctggt
ggcattaaagaaggaagcaacattaccctgacttgttctgtggatatcctgacaccttct
ggtcaatcacctcagatttcatacttattctataagggacagacacaagatgtcctgctg
aaaattgttacaattcaggcccaagaatctcaatatctaatccaatcggctcgaccctca
cattctggatactacagttgtgaagtggcagcagggagtcaaagggaggaaagtgcttcc
acattcataacagttacaggaaatttacagacacctgtactcaccgtacatccaatagag
gtgattctgggagatttaactgagttgtgctgtacatctgaggaaattcctcctctgaca
ttcatattctacacatataaaaatggactgaacccagtgcgtctccatgaaaattcaagc
aaaaacaaaactgtgacacaccaactgagggtgacaacagatacagagaaaaactatagt
tgtacaatcgaagtgcctgcagccaggagtgtctcaaagcacagtgaagtagtacagctc
tcagtacaaaatccattttcagatccaatgtttgaaattgaaccgtcaaatgaaatattt
gaaggagataaactcaccattaaatgcagggttacgcatttgcttcctcatgtaaaacct
caattaatcattatgaaggatacaactccaataagtacaggaaatactagctcagtggta
ttttctaaaacagcaaatgcaactgatacaggaaagtatgggtgcatggcgagatggaac
agtgtatctcaagctataagaagacaagtgactgtggcagtaccagtttccataccaact
ttaatgtcaacacccattggtggtaatgtggtagaagacggttctttggatctttcatgt
gctgtgttgggcggatcctatccaataacttacaagttttaccaagatacatcagaaatt
cctctgcatcaaataacattaaatgcgaccacagcagtccatcatattgtttcagttaag
aatgggcacagtggaaagtattcctgtgaggtatcaaattctgcaaatcaaatcactcga
acaaaaaaaagtcagtatgttactataattgtaagagttccagtatccaaccctacaata
aaatgcaattctttaaaagatgtatataaaacaggagaatgggtaatcctgctttgccag
tcaaccaatggaactgttcctataacttattcattgttctcaaataaaagactcatctac
ttgatctcgagatctgatagagagcctgcaacttttaaagttctcttaaatgaaaccaaa
gatggcggggagtacaagtgcaaagctgagaatgaaattccaaacttgtccaaatacagc
aaaggaataaacattacaataaaagttcctgtatccaaaccactgatttatcctctgttg
aattctaccaaggtgaagttaggggagactgtgacactgcactgcgtaacaagcacagga
actctaccaatcacttatacactgtatcggaatcaatcaagtctccaatcagctactaca
atgcaggcaataccagcaggctttaacataacagtagattcagtggagcattctggagtg
tacagctgtaaagctgaaaatcaaatttcttcagaacacagtaatggattatcctttcgt
attttacgtggtggatttctatggtggatttacataataatagtcgtaatttcactaatg
ataataggactggcaatattaatagctcaacattgtaagcagtggtgcaagaataatgaa
ggtataaaccaggaggatgaaagctctaaaccaagtcagagagggcctttgcaacataat
caagggtctctgaaaaaaagtatggaggttatttatagcaaaattggaaacattacgcat
ccaaagctcaaccaaccagattctgacatgctgatagaacagcaagaagctgattcagac
aggaatcatgagggggactacactaacatcatgtcatatcaaggaaatgttacagaagat
gattctgaaagtgattgcgaagcagattacacgaatgtgacatcaaaaagaaaagctgcc
agtgctgacagcgatacctcctctgatgaaaccaatcacgttttatacactcaacttgat
ttagctgctctgcagaataacagtacaccacagccacaaggacccacaatatatgcttct
attgctttagataagttacggtga
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