Chiloscyllium plagiosum (whitespotted bambooshark): 122562347
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Entry
122562347 CDS
T08871
Symbol
fbxw10
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122562347 (fbxw10)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122562347 (fbxw10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
F-box
F-box-like
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
122562347
NCBI-ProteinID:
XP_043571158
LinkDB
All DBs
Position
24:complement(20701260..20765718)
Genome browser
AA seq
1083 aa
AA seq
DB search
MHDLDAAGKMTEFNFHAPSTLTCRTDCSAPRCGSCYTCTLQRRLASTKQWFLRAGDITKQ
QFLIGLVRRVDSLDLLLQLNRLLQPTLSKDFTHSRSSANPSLPEDFSTLSSDRSLNKLDL
HNYVTSAWEWFTGSKRWTKTNYLLGLFQLCDIKHLHHIGNLIRTLIIGRSTPEFFEWKGE
EKDEDDNLLHESNSTFRTDEHPELEQLTEIWPEYSEVTLEMLPSSLLYRPEDKTVAASRL
GLQLKSKKTKKKQIVSSRIANESPVIVEPPIPIRITSPFEATSGVTYHKDFIRCLPIHLA
KYVLGFLDQNSLQNCMLVSRHWAYLGKEFTRDKLAIQCIFDEITKLQATAPHNINTVYAK
ICQIPVPRIDEKGFTIPTQNLKKKIGLAASYIGIHTDIVQMEERNVYCGPYNIIVIKQFT
DVSRVIHYDGGQWIAIASGDRRIRFLDINHSKDVPRSLSGHAGAIKAVILCEEQGFLLSG
SYDLTIRKWNLKTATCVTMYRGHTGFITCLSLHENMLVSGSTDCHAKVWDLQKGTCFHTF
KQDKSILSVAINATYVVSGNEKGVIHVWNIKPPSLVKVLTGHINSITCMTFDQWHLISGS
KDKCIKVWSMMGKFSDCLMTFKHPQEVLCLQFVYLRVISGCRDGKIRIFDLLNGICLRMM
RATGHGDPVLSIHIAGNRMVINTMSNVVKFQFEDIVWDYKAKASILDASTPQDKFKMAPL
RKQPYSYVRAQRMRRIGSTNEKIYHRQEKFSKDGLFHHARFLSARCMKAAQRIQSDSMKA
LSLRESQYRDHSLQSEFDLKPPSAYMSSSEMLTQKHLKQDADSRILYGERPKSLSAASRF
LSVSEQDALKRIKRHKFYKPKTVDQIYLTVNAIHNYLRFDETSINTLYNNSLSEDWGQLL
CPFEDTVKKGSDTAMKKTTVKISDTVDAVGLRDDCIDVKTLMAPFELKMKKFKEKDKFSG
LDTKCFVTKPMIKRSKSAVAFVDSVKFRRAKDRPQTAVEEINKSMSSRTTSSNNGSRAKA
FILTDSATATIEPKHKLQYIVDINPYRNNSGFTLSTMTQQKEYAEKIAKDHNGQQQRTSN
IHS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatctggacgcagcgggtaaaatgactgagttcaactttcacgccccatccacg
ctgacctgccggaccgactgttcggcccctcgctgcggctcctgctatacctgcacgctg
cagcgcaggctagcctccaccaagcagtggttcctgcgagctggggacatcaccaagcag
cagttcctcatcgggctggtccgcagggttgacagcctggatctcctgctgcagctcaac
aggctcctgcagcccaccctcagcaaagacttcacccactcccgctcgtctgctaacccc
agcctgcccgaggacttcagcaccctgagctcagaccgctccctgaacaagctggatttg
cacaactatgtgaccagcgcctgggagtggtttactggctccaagcgttggaccaaaaca
aactacctgctgggcttattccagctgtgcgatatcaagcatctacatcacattgggaat
ctgatccgaacacttataatcggcaggagcactcctgaattctttgaatggaaaggtgaa
gagaaagatgaagatgataacttgctgcatgaatcgaattctacctttcggacggatgaa
catcctgaactggagcagctgactgaaatctggcctgagtattcagaagtcacacttgaa
atgcttccatcgagcctgttgtatcgaccggaagacaagactgttgcagcatcaagactt
ggtcttcagttgaagagcaagaagacaaagaagaagcaaatagtgtcctcgagaatagct
aatgagtcacctgttattgttgaacctccaataccgatacgtataacttcaccttttgag
gctacttcaggagtcacatatcataaggacttcatccgctgtcttcctattcatctggca
aaatatgttcttggctttctagatcagaactctctccaaaactgcatgcttgtgtcacgc
cattgggcctacctgggaaaggagtttacaagggataaactagccatccaatgcattttt
gatgaaatcacaaagttacaggctacagctcctcacaatattaacacagtgtatgcaaag
atctgtcaaattccagtaccaagaatagatgagaagggattcaccataccaacacaaaat
ttgaagaaaaagattggattggcagcatcatacattggcatccatactgacattgtgcaa
atggaggagagaaacgtctactgtggtccatacaatataatagtcatcaaacaatttacg
gacgtttccagggtcattcactatgatggtggacaatggatagctatagcctctggagac
agaaggataagattcttggatatcaaccattccaaagatgtaccccgttcattgagtgga
catgctggagccatcaaggcagtgattctttgtgaagagcaaggttttctccttagtgga
agctatgaccttactatcagaaagtggaatctgaagactgcaacgtgtgtgaccatgtac
cggggccacacaggatttattacctgtcttagcctacatgagaacatgcttgtatcagga
tcaacggactgtcatgctaaagtgtgggaccttcagaaaggaacctgttttcataccttc
aagcaagacaaatcaattctatcagtggctatcaatgcaacatatgtggtgagcggcaat
gagaaaggagtaatccacgtgtggaacatcaaacctccttcattagttaaggttctgact
ggtcatataaactcaatcacgtgtatgacttttgatcaatggcatttgatcagtggaagc
aaggataaatgtattaaggtgtggagtatgatgggaaaatttagtgactgtttaatgact
ttcaagcatccacaggaagtgctatgtctgcaatttgtttaccttcgtgttatcagtgga
tgcagagatggaaagattcgaatttttgacctattgaatggtatctgtctaagaatgatg
agagcaactggccatggagatcctgtgctatccatacatattgctggaaataggatggta
ataaacacaatgtccaatgtggtgaaatttcagtttgaggatattgtatgggattacaaa
gctaaagcatcaatccttgatgcctcaacaccacaggacaaatttaaaatggcaccgctg
aggaaacaaccatacagttatgtacgtgctcagcgcatgagaaggattggttcaaccaat
gaaaagatctaccatagacaggagaagttttcaaaagatggtctgttccaccacgcacga
ttcttgtcagctagatgcatgaaagcagcacagaggattcagtcagactccatgaaagct
ctcagcttgagggaatcccaatatcgagatcacagtctgcagtcagaattcgacttgaag
ccaccctcagcatacatgagtagttcagaaatgctcacacaaaagcatttaaaacaggat
gcagactccagaattttgtatggtgaaaggcctaaatcattgtctgcagcttctagattt
ttgtcagtgagtgagcaggacgcattaaaacgcattaaaagacataagttctacaagccc
aaaactgtagaccagatttacttgactgtcaatgctatccacaattacctcagatttgat
gaaacatcaataaacactctctacaacaattcactttcagaagattggggtcaacttctt
tgtccttttgaagacacagtgaaaaagggaagtgatacagcaatgaagaagactactgtc
aaaatcagtgacactgttgatgctgttggactaagagatgactgcattgatgtcaaaaca
cttatggcaccttttgagttgaaaatgaaaaaatttaaagagaaagacaaatttagtggt
ttggacacaaaatgttttgtcacaaaaccaatgataaaacgatcaaaatcagcagtagcc
tttgtggactctgtcaaatttagacgtgcaaaggatcgaccccaaactgcagttgaagaa
atcaataagagcatgagctctagaacaactagctccaacaatggatctcgagccaaagcc
ttcatacttacagattctgcaactgccactatagaacccaaacacaagttgcagtacata
gttgacataaatccatatcgaaacaacagtggcttcactctttcgacaatgacacaacaa
aaggaatatgcagagaaaattgcgaaggaccataatggtcaacagcaaagaacaagcaac
atacacagttag
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integrated database retrieval system
