Chiloscyllium plagiosum (whitespotted bambooshark): 122562369
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Entry
122562369 CDS
T08871
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122562369 (ric1)
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
122562369 (ric1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
PEP5_VPS11_N
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
122562369
NCBI-ProteinID:
XP_043571180
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All DBs
Position
2
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AA seq
1421 aa
AA seq
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MYFLSGWPRRLLCPLKGSEKPFHIQPDSRRLVFALLSQTQISLWYSRPSVLIVSYKESAK
AASQFGSYERTEWKPDSSMIAVATTNGYILLFDIVCSGQEKCLYEPVYPKGNPRVKVTPG
YKEEQCAPSLTVEMKKVLDFQAKITSLQSMQDDLVIATNDGILHLIHWDGLTNGRKAINL
CSVPFSVDLQSSRGPSLDFESVHIQDMEYGSTLDGFAVVFDDGRIGFVTPVSSKLTAENL
HGVWAQEITDGTCVAVNNKYKLMAFGCANGSVLVYTMDTTTGAMQLSHKLELTPKHYPDI
WNKTGAVKLIRWSPDCSVAMVTWACGGLSLWSVFGAHLFCTLGGDFAHYSDGTKKEPMKI
SSMSWGAEGYHLWAISSDSTQVGNDLENKNVVQQAEILQFQFIKSALTVNPCMNNQEQVL
LQGEDRLYLNCGDALQNQNSSTAAANSGHQPVREKNPLYNDILVPQGLSTLLGHRHWHVV
QIHSTYLESNWPIKFAAIDQLGQCVAVAGKYGIAHYALFTRKWKLFGNITQEQNMAVTGG
LAWWNDFIVLACYNLVDQQEELRLYLRSSNLDNVFAHITKVQSETLLINVFKDMVILFRV
DCSICLYSIDRKDDGPNPTASVQVLQEVSMSRYIPHPSLVVSITLTSVRTETGITLKMPQ
QACAAESIMLNLAGQLIMLQRDRSGPQVREKDSVSKQKKLLPFCAPVVLAQCVENVWTTC
RSNKQKRHLLEALWLNCGEAGMKVWLPLFPRDNRKPHSFLSRRIMLPFQINIYPLAVLFE
DALVLGAVNETVLYDNLYTRNNEKEPLEVLFPFCTVERTSQIYLHHILRQLLVRNLGEQA
LLLAQSCVTLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHC
ARKTEYALWNYLFAAVGNPKDLFEECLLAQDLDTAASYLIILQNMEVPAVSRQHATLLFS
TALEHGKWDLCRHMIRFLKAIGAGELETPPPTPTHQEPSSTGGFEFFKHRSISFSQSVEG
LSASKFNLQKTLSMPSGPSAKRWSKDVDNAENMYIDEMLWRHARRLLEEMRLKDLSSFAA
QLGFELIGWLSKERTRAARVEDFVKALKRLHNDFLWPVPVIPSSCLVNSPFKNGKYKTVG
EQFLNSQSTETFVTSDLESGVINAHAGHICLSLNTAHTQTDSGSLQGPQTQDAILSPLLS
KGDECSIGSATDLTETSSMVDGDWTMVDEGFSALSLTQSDLEYISMELANKGPRKSQVQL
RYLMHIFMEAGCLEWCMIIALILRDSAVICQIISSVQHSEVPTDILQGIKSGMLAVDGWA
LADCPGYKPFLNRIKPQLQKLNEITEEQIQPEAFQPLSRVSISKTVEAPSSWTEDNRNAA
SHINGSQNDGSGITSRPEDDGQEEEEEQQLEDEGSYECSVS
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctgagcggctggccccggaggctgctgtgtcccctcaagggctcggagaag
ccgtttcacattcagcctgactcgcggaggctggtgttcgcactcctgtcgcagacacag
atcagcctatggtacagcaggcccagtgttttaattgtaagctacaaggaatctgcaaag
gcagcttcacagtttggatcatatgaaaggacagaatggaagcctgacagcagcatgatt
gcagttgcgactacaaatggatacatcttactctttgacattgtgtgctcaggacaagag
aaatgcttatatgaaccagtatatcccaaaggaaatccaagagtcaaagtcactccaggt
tataaggaggaacaatgtgctccatccctaactgtggagatgaagaaagtgctcgatttc
caagcaaaaatcacaagtttgcagtccatgcaggacgatttggtcattgctactaatgat
gggatactgcaccttattcattgggatggcttgacaaatggaaggaaagccattaatctt
tgttcagtcccattttctgtagacctgcagtcttcgagaggtccttcattagattttgaa
tctgtacatattcaagacatggaatatgggtcaactcttgatggttttgctgtggttttt
gatgatggtcggattggtttcgttactcctgtgtccagtaaacttacagctgaaaacttg
catggtgtgtgggcacaagaaataaccgatggtacttgtgtggctgtaaacaacaagtac
aaattaatggcctttgggtgtgccaatggttcagttttagtttacacaatggatacaact
acaggagctatgcagttgtcccacaagttggaattaactcctaaacattaccctgatatt
tggaacaagactggggcagtgaaactaatcagatggtcacctgattgtagtgttgctatg
gtaacatgggcttgtggaggcttatccttatggagtgtttttggtgctcatctattttgc
acactgggtggagattttgcgcattattctgatgggaccaaaaaggaacctatgaaaatc
agctctatgagttggggtgctgaaggctatcacctttgggccatttccagtgatagtact
caagtgggaaatgacttggagaacaaaaatgtagtacagcaagcagaaattctgcagttc
caattcatcaaaagcgctttaacagtcaatccctgcatgaataaccaagagcaagtactt
cttcaaggagaagatcgactgtatttgaactgtggtgatgcgttgcaaaatcaaaattca
agtactgcagcagcaaattcaggccatcagccagtcagggaaaagaatcctctctataat
gacattctagttcctcagggtttaagcactttattaggacacaggcactggcatgttgta
cagatccatagtacctatctagaaagtaactggccaataaagtttgcagcaatagaccag
ctgggtcagtgtgttgctgtagcaggcaaatatggaattgcgcactatgctttgtttacg
aggaaatggaagctttttggaaatattacccaggaacagaatatggctgtgactggtggt
ctcgcatggtggaatgacttcattgttttagcctgttataatttggtcgaccaacaggaa
gagctacgactttatctccggtcttccaaccttgacaatgtttttgctcatattaccaaa
gtgcaatcagagactttgctcataaatgtcttcaaggacatggtgattttgtttagagtg
gactgctctatctgcttatacagtattgatcgaaaagatgatggtcctaatcccactgcc
agtgttcaagttcttcaggaggtatccatgtcacgttacatcccacacccttcactcgtg
gtatcaataactttgacctctgtgagaacagagacaggcatcaccttgaaaatgccacag
caggcctgtgctgcagagagcattatgctcaatttagcaggtcagcttatcatgctacaa
agggatcgatcaggtcctcaggtacgagagaaggacagcgtttccaaacaaaagaagctt
ctccctttctgtgctccggtggtgcttgcccagtgtgttgaaaacgtatggaccacctgt
cgatctaacaaacagaagcgtcatttgctggaagctctctggcttaattgtggagaagca
gggatgaaagtctggctccctctttttcctagagacaatcgcaagccacattcctttctt
tccagacggatcatgttgcctttccagatcaatatctatcccctggctgtcctattcgag
gatgccttggtccttggtgcagtgaacgaaactgtactgtatgacaacttatacacacgc
aacaatgaaaaagaacctttggaagtcctattccctttctgtactgttgagaggacctcc
caaatctacctccatcatattcttcgccagctcctggtcagaaaccttggtgaacaggct
ttgcttctagctcagtcttgtgtcacattaccatactttcctcatgtactggaactgatg
cttcatgaagtattggaagaagaagctacctcccgggaacctattcctgatcctctgctt
ccaactgtggcaaagttcatcactgaatttcctctttttctccagacagtagttcactgt
gctagaaagactgaatatgccttgtggaattatttgtttgctgctgtaggcaacccaaaa
gatttgtttgaagagtgtctgttggcacaagatttggacactgctgcatcttatctcatc
atcttgcagaacatggaggtccctgcggtcagtagacagcacgccacactgcttttcagc
acagctctggaacacggaaagtgggatctttgccgtcatatgatccgtttcttgaaagcc
attggtgcaggagaattggagacccctccaccaactccaacccatcaggaacccagttca
actggtggttttgagttcttcaaacatagaagcatcagtttttcacagtcagtggaaggc
ctcagtgctagtaaatttaatctgcagaagacattaagcatgccttcagggccctctgcc
aaaaggtggagtaaagatgttgacaatgctgagaatatgtatatagatgagatgctttgg
cgtcatgcacgaagactgctggaagagatgagactaaaagatctcagcagctttgctgca
cagttgggatttgagcttattggctggctcagcaaagaaagaactcgggcagctcgagtt
gaggattttgttaaggctttaaaaagactacataatgactttctttggccagttcctgtt
attccttccagctgtttagtaaattcaccattcaaaaatggcaaatataaaacagttgga
gaacagtttcttaactctcagtcaactgagacttttgtaaccagtgatttggagagtgga
gtcataaatgcacatgctggccacatctgtcttagccttaatactgcacacacgcaaaca
gattctggctcattgcaaggacctcagacgcaagatgcaattctgtcaccattactttca
aaaggtgatgaatgcagtatcggatcagcgactgatcttacagaaaccagttctatggtc
gatggtgactggactatggtggatgaaggtttttctgcactcagtctaacacagtctgat
ttggaatatatatcaatggagttggccaacaaaggccctcgcaagtcacaggttcagtta
aggtatctgatgcacatttttatggaagctggctgtttggagtggtgtatgattatagcc
cttattcttcgagattccgctgtgatctgtcagataatcagttcagtccaacactctgaa
gttcccacggacattttgcagggtataaaaagtgggatgctagctgtggatggatgggct
ttagcagattgccctggatacaagccatttctgaatcgtataaagccccagctgcagaaa
ttgaacgagatcacagaggagcagattcagcctgaagcttttcagcctttgagccgggtc
agcatatcaaagacagtggaggcccccagctcttggacagaggacaatagaaatgctgca
agtcatattaacggtagccagaatgatggcagtgggattaccagcaggccggaagatgac
ggtcaagaggaagaagaggagcagcaacttgaggacgaagggagttatgagtgttctgtg
tcatga
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