Chiloscyllium plagiosum (whitespotted bambooshark): 122562411
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Entry
122562411 CDS
T08871
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122562411 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122562411 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122562411 (clip1a)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122562411 (clip1a)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
122562411 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
SNCAIP_SNCA_bd
Motif
Other DBs
NCBI-GeneID:
122562411
NCBI-ProteinID:
XP_043571203
LinkDB
All DBs
Position
25:complement(26363220..26518835)
Genome browser
AA seq
2222 aa
AA seq
DB search
MSLLKPSGLKAPSKIAKPGSTAVKQAAPSQPSTKTSPGEKSSTSNAETQEEFVDDFRIGE
RIWVNGSKPGFIQFLGESQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRPS
KLSRSPLTDGEANGSQTHATSVSRATSPTSTSASVATASSTTTAQKAGLGKSVATQESAA
PSAMTNLLKTASESVSNLSEAGSVKKGERELKIGDRVLLSSTHMQNNMKTGEYIAHARNG
TESLVLTWYVCRMVHRLPHRRRIASFSANILWHRYFQCQTKYGLFAPVHKVTKIGFPSTT
PAKAKTTVRKMVATPSNLKRSPSASSISSLSSIASSISGRPSRSGLLTETSSRYARKISG
TTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEVEQELTLLRTGHEQHVLEMETK
MDQLRALVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKEL
EQSLLFEKTKAEKLQRELEDTRVATVSEKSRIMELEKDLVSRTKEVAELRHRLMSTEGSG
NVDSTSPLLEELNSMRDKLTTMSTEHKNELDALKEKFETSETAHQKIVRQLQADSGKISK
ENEILKSKLDQANIENSEVINLWKCKLESAIESHQQAMEELKLSFSKGAGAQTTELLELR
STLEMLKTEHQMELENIKIKQDFEKSNYLKKMEELKSQLLAVTTESEKGTEILKSQLESA
TNQHLEEMEETLAKLQNTQLKVKELQVLQDKCNEQAQIIEALTAKVTMAEEKVLGYELLQ
EAESQGKEEIKRLEEKLMVFELQRKSSEALKHSEGSKVTDLTKQLEEQAQAVVNLEKNLA
IVSQDKQILEQQLQSMKEKLDSTSETQQKLQQTMQETLVELNVKEEQNISLSSELLELKS
QLAALERKMKVEEERAEQLVQDKSKLENTVSEMMKSSGDNSAQLTKMNEELKEKERKQEE
LQALYHQSNDKIASLQENLEQLTCKSERTQQEEQQKHQLELKTMLEKITDLQTQVETHGA
HNKELQIIHEKDLSEIKAKNDTLVKELKQNLEKTKQALNSSQEKNNESEKLIVELKQQVE
EVQSLTFELASAKSQYEQITEDMRALKGDKEKMIQQGDALKSEKESLFSELSELKLQYFS
LQKDKQLLESKNEKLHLEKKAFLKERQDFECKQQQFLVEKETLEVEKEQFLIKTKYLQDL
LDKLTKENEALQGSQSNLSKQLAEIQISSKVVDCERAQLLQEKKELFLAYKIAITEKEEF
SKEKDKVIQNLRTSCTETATALEKLTQERDDLMIEKDSDLLKYSKLEVQNEFLAKEKDLL
QSAFNELASEKETLENENRNLSLSLQEIVLEKQTLINQRDQLQNYSDLSKEEVEKYMKES
AEHKASISSLSKLLDEIKNSREVTDSERIQLLQEKEVLTTSQRKLTAERDELAKEKNELI
AKLQKSLEEATNIEKKLNEENDAVKTERDSLRLKQKHLDTLCESLQREKEILETKSHVQL
SENEALLGEIAQIKSEQQQLISENTARATEWDQLLSNIESLKKEIDKLTKENGELQVSKS
NLSTLLDEVQNSKKTVDSERFCLFQEKQMLAAELQEQRSENEYITAQRVELEEKYNKLSE
QMRIFESQLIQNRNAAKMEKESLIMAHSKLQNNFQLLQTEIDALQAKNVELLSQQDMLVK
AKEIIDIERKTSACEKEDLIVEKNRLMSDVEQLKKELDIITKEKIEIEASQCNFSRLLDE
FRNSQEVSDLKKLKLREEKDNLLATVQKLHTEKEELLRMKDELAESLCKVREEAAVSAQD
HKEAVSKLQQLLCEKGILLEHEENLASKLKDLQVHQNITLSEKIEASKKVEEAGHLLEKA
MKEKNMLDQQKAEMLIELEEYTLKNQKLQNELEALKEQNSKCQEDLNQSKQQLSSENKRI
GSLCKEIEELKLAASQKSQQLAALHEENGKLASELDKSKDEVSSHQKLEEERSALNNQLL
EMKKSLPNNTSRESLLKKEFDEDKKSLQKSITTTSALITDRDKELEKLRNEITVLRNENA
MAKQLQSVVQSLESDKSKLEQKVQNLEKKINDNKRQLDNVTSSSGEPVIEKQSEGNDSAE
SQQMIDFLNSVIVDLQRKNEELKAKLAQIAEASLNGNDATDENNFGSLNETQTKKKPPPR
LFCDICDCFDLHDTEDCPTQAQMPEFPQHTTYHGNRNEERPYCDICEVFGHWTNNCNDDE
TF
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaaacctagtgggctgaaagctcctagcaagattgccaaaccagggagt
actgcagtgaagcaagctgctccttcacaaccatcaacaaaaacatcaccaggcgagaaa
tcaagtacatccaatgcagagacacaagaagaatttgtggatgactttagaattggagag
cgcatctgggtaaatggtagcaaacctggattcattcagtttcttggtgagagtcagttt
gctccaggccagtgggcaggaattgttttggatgaaccaattggtaaaaatgatggttca
gttgctggcgttcgatatttccagtgtgagcctttacgaggaatatttacaagaccttca
aaactatctcgaagcccactgactgatggtgaagccaatggttcacagactcatgcaaca
tctgtttctagagccacttcaccaacatccacgtcagccagtgttgcgactgcttcatca
acaacaactgcacaaaaagcaggattaggtaaatcagttgcaactcaggagtctgcagcc
ccttcagccatgaccaatctcttaaaaacagcaagtgaatctgtatcaaacctttcagaa
gctggttcagtcaagaagggagaacgtgaattgaagattggagatcgggttctgctgtca
tcgacgcatatgcagaacaacatgaaaacaggagagtacatcgcacatgcgcggaacggc
acagagtctttggtgctgacatggtatgtgtgcagaatggtgcatcgacttccacacagg
cgcagaattgcatcgtttagtgccaatattttatggcacagatattttcaatgccaaacg
aagtatggtctgtttgcaccagttcacaaggttaccaaaattggatttccctcaacaaca
ccagctaaagccaagacaactgtacgaaaaatggtagccaccccatcaaatctgaagcgc
agtcctagtgcatcatccataagctctttgagctccatagcatcgtctatcagtggtaga
cctagtcgttcaggattgctaacagaaacatcctcacgctatgcaagaaaaatttcaggt
accactgcattacaagaagctttaaaagaaaagcagcaacatattgagcagcttctggct
gaacgagatctggaaagagcagaggttgctaaagcaacaagccatgtgggagaagttgaa
caggagctcacattacttcggacaggtcatgagcagcatgtattggagatggagacaaag
atggaccagttacgagcgctggttgaggctgctgatagagagaaggtggagctgctgaac
cagctagaggaagaaaaaaggaaagtggaagaccttcagttccgtgtagaggaagagtcc
attaccaagggtgacttggagacgcagaccaaactggagcatgcccgcattaaggagctt
gaacagagcctgctctttgaaaagaccaaagctgaaaaactccagagggagttagaagac
actagggtagccacagtgtctgagaagtcaaggattatggagttggaaaaggatcttgtg
tcacgcacaaaggaagttgcagaacttcgacatagactaatgagcactgaaggctcaggt
aatgtggatagtacctctcctctcttggaagaactcaacagtatgcgagataagctaaca
acaatgagtacagagcataaaaatgaacttgatgcactcaaagaaaaatttgaaacctca
gaaacagctcaccaaaagattgttagacaattgcaagctgacagtggaaaaatatccaag
gagaatgaaatcctgaagtccaaattggatcaagccaatattgaaaattcagaggttatt
aatctgtggaaatgtaagttggagtctgcaattgaatctcatcagcaagctatggaagaa
ctcaagttgtctttcagtaaaggagcaggtgcccaaactacagagctcctagagctgaga
agtaccttagaaatgcttaaaactgagcatcaaatggaacttgagaatattaaaattaaa
caagattttgaaaagtctaactacctaaaaaagatggaagaactaaaatcgcaactatta
gcagttactacagagagtgagaaaggtacagaaattctgaagtcgcaactggaatctgct
acaaatcaacacctggaagagatggaagagaccttggcaaagttacaaaacactcaattg
aaggtaaaggaactgcaagtgttgcaggataagtgtaatgaacaggcccaaatcatagaa
gccctaacagctaaagtgacaatggctgaagaaaaagtgttaggatatgaattgctgcaa
gaagctgagtctcaaggtaaagaggaaatcaaaaggcttgaagagaagcttatggtcttt
gagttacaaaggaaaagcagtgaagctttaaaacattctgaaggtagcaaggttactgat
ttgaccaaacagcttgaggaacaagctcaggcagttgttaatttggagaaaaacctggct
atagtgagtcaggataaacaaattttggaacagcaactgcaatccatgaaggaaaagctt
gacagcacatcagagacacagcaaaaactacagcagactatgcaagagacgcttgtcgaa
ttgaatgtgaaagaagaacagaacatatcactatcttctgaattattagagctaaaatct
cagcttgctgctctggaaagaaaaatgaaagttgaagaggaaagggcagagcagctcgtt
caagataaatccaaacttgagaataccgtctctgaaatgatgaagtcttcaggagataac
tctgcacagctgacaaagatgaatgaagagttgaaagagaaagaaaggaaacaagaggaa
ttacaagctctgtatcatcaatccaatgataagattgctagtttacaggaaaatttggag
caactcacatgtaaatcagaacggactcagcaggaggagcagcagaaacatcagcttgag
cttaaaacaatgctggaaaaaataacagatctgcaaacacaggtggagacacacggtgca
cacaataaagagctgcaaattattcatgagaaagacctttcagaaataaaggcaaaaaat
gatactctcgtgaaggagctcaaacagaacctagagaaaaccaaacaagcactgaatagt
tcccaagagaagaataatgaaagtgaaaaactgatagtagagttgaagcagcaagtggaa
gaggtccagtctttaaccttcgagctagcatcagccaagtctcagtatgagcaaataaca
gaggatatgagagctttgaagggggataaagaaaagatgatccaacaaggagatgcattg
aaatctgagaaagagtccttattctctgaactttcagaactgaagttgcagtatttttcc
ttgcagaaagacaaacaattgttagaatcaaagaacgagaaattgcatttggaaaaaaaa
gcatttttaaaagagaggcaggattttgagtgtaaacagcaacaatttcttgtggaaaag
gaaactttagaagttgaaaaggaacagtttctcataaaaacaaagtatctgcaggatcta
cttgataagttaacaaaagaaaatgaagccctccaaggctctcagtctaacctaagtaaa
caattggcagaaattcagataagcagcaaagtagtagattgtgaacgagcacagctgctt
caagaaaagaaagagttgtttttggcctacaagatagcgattacagaaaaagaagagttt
tcaaaagaaaaagacaaagttatacaaaatctccgcacatcatgtacagagacagccact
gctcttgagaaattgacacaagaaagagatgacctgatgatcgaaaaggactctgattta
ctaaaatattcaaagcttgaagttcagaatgaatttttagctaaggagaaagatctgctc
caatcagcatttaatgaacttgcatctgagaaggaaactcttgagaatgagaaccgaaat
ctcagtttaagtttacaggagattgtccttgaaaagcaaactttaattaatcaaagggac
caactacagaattatagtgatctttcaaaggaagaagtagaaaaatatatgaaggaaagt
gcagagcacaaggcctcaatctccagcctgtcaaaactcttggacgagattaagaatagc
agggaggtaacagactctgaacgtatccaactactacaagagaaggaagtgctgacaaca
tctcaaagaaaactgacagcggaaagggatgaacttgctaaagaaaaaaatgagttgatt
gcaaagctgcagaaatcccttgaagaggcaaccaacattgagaaaaagctcaatgaagaa
aatgatgcagtgaaaactgagagagattcacttcggctgaaacagaaacatcttgatact
ctttgtgaatctttacaaagagagaaggaaatcttagaaacaaaaagccatgtgcaattg
tcagaaaatgaagctctgttgggcgagatagcccaaattaaatcagaacaacaacagctc
atctctgaaaatacagccagagccacagaatgggatcagctcctcagtaacattgagtcc
ttaaagaaagaaattgacaaattaaccaaagaaaatggagagctccaggtctcaaaatca
aatttgtcgacacttttggatgaggttcagaacagcaaaaaaacagtggattcagagaga
ttttgcttgtttcaggagaagcagatgctggcagctgagcttcaggagcagcgctccgaa
aacgaatatattactgcccaaagggtggaattagaggaaaaatacaataaattgagtgaa
cagatgagaatatttgagagccaactaatacaaaacaggaatgcagcaaaaatggaaaaa
gagtctctcattatggctcattcaaaacttcaaaataattttcagctattgcagacagaa
atagatgcccttcaagctaaaaatgttgaactactttcacaacaagacatgctagtaaaa
gcaaaagagatcattgatattgaacgaaagacgtctgcttgtgagaaagaagacctaata
gttgagaaaaatagactgatgtctgatgttgaacagctgaagaaagaacttgatataata
acaaaagaaaaaatagagatcgaggcttcacaatgcaatttttcaagacttctggatgaa
ttccgcaatagccaggaggtatctgacttgaaaaagttaaagctgcgggaggaaaaagat
aatttactggctacggtacaaaaattacatacagaaaaagaagagcttcttagaatgaaa
gatgagctagctgaatccctctgtaaggtacgtgaagaggctgctgtttctgctcaggac
cacaaagaagctgtatcgaaactgcaacagctgctatgcgaaaaagggatattgctggaa
catgaagaaaatcttgcttccaaactaaaagatcttcaggttcatcaaaatattacttta
tcagagaaaattgaggcttccaaaaaagttgaagaggctggacacttattagagaaggcg
atgaaggaaaaaaatatgctggatcaacagaaagcggaaatgttgatagaattagaagaa
tacacgctgaaaaatcagaagcttcaaaatgagctggaagctcttaaggaacaaaacagt
aaatgccaagaagatttgaaccaatcaaaacagcagctcagctctgaaaataaaagaata
ggaagcctttgcaaagaaatagaggagctgaagctggcagcatcccagaaatcccagcag
ctggcagcactacatgaagaaaacggcaaacttgcaagcgagctggacaaaagcaaggac
gaagtcagcagtcatcagaagctcgaagaggagcgatctgcactcaataatcagctgcta
gaaatgaaaaaaagcttgcccaataacacttcaagagaatctttattaaagaaagagttt
gatgaagacaaaaagtccttgcagaaatccatcactactactagtgccttgatcacagat
agagacaaagaactcgagaaactcaggaatgagatcacagtgctacgaaatgaaaatgcc
atggcaaaacaattgcagtcagtagtccaatcattggaatctgataaatcaaaacttgaa
caaaaggtgcagaatttggagaagaaaatcaatgataacaagaggcagcttgacaatgtt
acatcctcttcaggtgaaccagtcattgaaaaacaaagtgaaggaaatgattcagctgag
agccagcaaatgattgatttcctgaactctgtgatagtggatttacaaaggaagaatgaa
gaactgaaggcgaagctagcacaaattgctgaagcgtcccttaatggcaatgatgctact
gatgaaaacaattttggcagcttaaatgagacacaaacaaagaaaaaaccaccacctcgt
ctcttctgtgatatctgcgattgctttgacctccatgatacagaggattgtcccacacaa
gcacagatgcctgaatttccacaacatactacttatcacggcaatagaaatgaagagcgg
ccctattgtgacatctgtgaagtttttgggcactggacaaacaactgtaatgatgatgaa
accttctaa
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