Chiloscyllium plagiosum (whitespotted bambooshark): 122562498
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Entry
122562498 CDS
T08871
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 isoform X1
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122562498 (chrna6)
04082 Neuroactive ligand signaling
122562498 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122562498 (chrna6)
Ion channels [BR:
cpla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122562498 (chrna6)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122562498
NCBI-ProteinID:
XP_043571272
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Position
2:complement(104673837..104682409)
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AA seq
492 aa
AA seq
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MTAIRKPHPLIFIVLPLFMQGCFSSKAEDRLFRRIFRRYNQHIRPVENVSDPVTVQFEIS
ISQLVKVDEVNQIMETNLWLRHIWNDYKLRWNPVDYDGIESIRVPSDHIWKPDIVLYNNA
VGDFQVEDKTKALLKYDGTVTWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKI
DLAIIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEAIYVDITYSFYIRRLPLFYTIN
LIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEY
LLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPRWVRRVFLHFLPRVMLMKRPLDEKQAEN
SRNRQRKANHLQTNCASYMEQSDFKVNKDQPKFPCQYCKQPSDDASCNISRYISPPFETL
FGVSLLSPEIRQAIENVKYIAENTRSQNAAREVEDDWKYVAMVIDRIFLWVFVLVCVLGT
AGLFLQPLMAAE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagctattaggaaaccgcatccattaatcttcattgtcttgcctttatttatgcag
ggttgcttttcctccaaagcggaggataggctgttccggaggatttttcgccgatataac
cagcacatcaggccggtggagaatgtgtctgacccggtgactgtacagttcgagatttcc
atctcacagctggtcaaagtggacgaggtcaaccagatcatggaaactaacctttggctg
cgacatatctggaatgattacaaactgcgatggaacccagttgactatgatgggatcgaa
tccatcagagttccctctgaccacatatggaaaccagacattgtgctgtacaacaacgca
gtgggagattttcaagttgaggacaaaacaaaagcgttactcaaatatgacggaactgtt
acttggatacctcctgccatttttaaaagctcctgtccaatggacatcacttattttcct
tttgactatcagaactgttcgatgaaatttggatcctggacctatgataaagccaaaatt
gaccttgcgatcattgggtccaaagtaaacttgaaagatttttgggagagtggcgaatgg
gaaatcattgatgctcctggatataaacatgacattaagtataattgttgtgaagctatt
tatgtggacatcacttactcattctacatacgaagacttcccttgttctacacaatcaac
ctgatcattccttgcctgttgatatcctttctgactgtgttagttttttatttaccctct
gactgtggcgagaaggtcactttgtgtatatctgtactcctctccttgacagtatttttg
ttggttatcactgaaaccatcccttctacctctctggtgattcctctgattggcgaatac
cttttatttacaatgatctttgtcactctgtccattgttataactgtatttgttctaaat
gtccactatcgaactccaactactcacaccatgccaaggtgggttcggagggtcttcctg
cacttcttacccagagtgatgttgatgaaaaggcctttagatgaaaagcaagctgaaaac
tctaggaacaggcaaaggaaagctaaccatctccaaacaaattgtgccagctatatggaa
caaagcgatttcaaggttaacaaagaccagccaaaatttccctgccagtactgcaaacag
cccagtgatgatgcttcctgtaacatttccagatatatcagcccaccatttgagactctg
ttcggtgtctcactcctttctcctgaaatccgacaggctatagagaatgtcaagtatatt
gcagagaacacaaggagccagaatgctgccagagaggtggaagatgattggaaatatgtg
gcgatggtaattgaccgaatattcctgtgggtatttgttttagtttgcgtactgggaact
gcggggttgtttttacagccactaatggctgcagagtaa
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