Chiloscyllium plagiosum (whitespotted bambooshark): 122562505
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Entry
122562505 CDS
T08871
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122562505 (pus1)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122562505 (pus1)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122562505 (pus1)
Prokaryotic type
122562505 (pus1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
122562505
NCBI-ProteinID:
XP_043571284
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All DBs
Position
25:2039265..2057989
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AA seq
400 aa
AA seq
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MSMAAPAAGACREEPICGEQELGKRKLSAGERPDAGKRLKEDPGGEVNQKPPKRKVVLLL
SYSGKGYHGMQRNVGSSQFKTIEDELVKALVKAKCIPENHGDDMRKMSFQRCARTDKGVS
AAGQIVSLKLWLIEDLLDKVNAHLPAGIKILGLKRVTGRFNSKNTCDARTYFYMLPTFSF
AHKDYDRQNIEYRLSSDTLSHVNRLLASYKGTHNFHNFTSGKGPRDPSAKRYIMEMYCEE
PFVRQGMEFAVLKVKGQSFMMHQIRKMIGLVIAIVRGYAPESIMVRSWGEEKVDVPKAPG
LGLVLDTVHFEKYNNRFGNDGVHQALEWQDIEDQIMGFKEDHIYPTIIQTEIEEQSMANW
LSTLPIHDFSATASGVQINQNHIKKVTEDLDEGSDGGDSD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggcagctccagcggctggggcctgcagggaggagccgatttgcggtgagcag
gagctggggaaacggaagctatcggccggggagaggcctgacgccgggaagaggctaaag
gaggatcccgggggagaagtgaatcagaaaccccccaagaggaaggtggtgctgctgctg
tcctactctgggaaaggctaccatggcatgcagagaaatgttggatcatcccagtttaaa
acgattgaggatgagttggtgaaggcacttgtaaaggccaaatgtatcccagagaaccac
ggtgatgatatgaggaagatgtccttccagagatgtgcacggacagacaagggtgtttct
gctgctggtcaaattgtctctctgaaactctggctcatcgaagacctgttggataaggtc
aatgcacacctaccagcaggcattaaaatactaggactgaagagagtaactgggagattc
aactcaaagaatacctgtgatgctcggacctatttctatatgctgccaaccttctccttt
gcccacaaagactacgataggcagaatatagagtaccgtctcagcagtgacacactgagc
catgtcaacaggctattggccagctacaaagggacccacaatttccacaacttcacgtcc
gggaagggtccgagagaccccagcgctaagcgatacataatggaaatgtattgtgaagag
ccatttgtgaggcaaggcatggaatttgctgtcctgaaggtgaaaggacaaagtttcatg
atgcatcaaattaggaaaatgattggattagtgatcgccatagtgagaggttatgcccca
gagtccatcatggtccggagctggggtgaggaaaaggttgatgtcccaaaggctcccgga
ctggggcttgtattggacacggtccattttgagaagtacaacaaccgttttggcaacgat
ggagttcaccaggcactagagtggcaagacattgaggaccaaatcatgggatttaaagaa
gatcatatctatccaaccatcatccagactgaaattgaggagcagtccatggccaactgg
ctgagtacgttaccaatccatgatttcagtgccacagcatcaggagttcagattaatcag
aatcacatcaagaaggtgactgaagatttggatgaaggcagcgatggaggtgactctgac
tga
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