Chiloscyllium plagiosum (whitespotted bambooshark): 122562519
Help
Entry
122562519 CDS
T08871
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04142
Lysosome
cpla04144
Endocytosis
cpla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122562519
04142 Lysosome
122562519
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122562519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122562519
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122562519
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122562519
Exosome [BR:
cpla04147
]
Exosomal proteins
Proteins found in most exosomes
122562519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
122562519
NCBI-ProteinID:
XP_043571316
LinkDB
All DBs
Position
25:complement(4059083..4112022)
Genome browser
AA seq
1690 aa
AA seq
DB search
MAQILPIRFQEHLQLQNQGVNPANIGFSTLTMESDKFICIREKVGEQAQVVVIDLNDPAN
PIRRPISADSVIMNPASKVIALKDAGKTLQIFNIEMKSKVKAHNMVEEVTFWKWISLNTV
ALVTETAVFHWSMEGDSQPQKMFDRHASLAGCQIINYRTDLQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFADFKLEENPTQSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFTKRAVDVFFPPEAQTDFPVAMQIGTKYGVIYLITKYGYIHLYDLESGACIYMNRIS
AETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEELFARKFNTLFAQGNYAEAAKVAASAPKGILRTPDTIRKFQTVPAQPGQASPLLQYFG
ILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFAQMLVQD
EEPLANINQIVDVFMENNLIQQCTSFLLDALKNNRPSEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDSERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEEVIKNLITVVRGQ
FSTDELVSEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSSVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPQLWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNNVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIDHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYME
VVKAANKNNNWEDLVKFLQMARKKAKESYVETELIFALAKTNRLSELEEFVNGPNNAHIQ
QVGDRCYDDGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGQEFRLAQICGLHIVIHADELEELISYYQDRGYFEELISLLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVITMM
SHPTDAWKEGQYKDIIAKVANVELYYKALQFYLDYKPLLINDLLMVLSPRLDHTRAVTFF
SKVNQLPLIKPYLRSVQNHNNKAVNEALNNLLTEEEDYQGLRTSIDAYDNFDNIILAQRL
EKHELIEFRRIAAYLYKGNNRWKQSVELCKKDCLYKDAMQYTAESKDTELSEKLLQWFLE
EGKQECFASCLFTCYDLLRPDVVLELSWRHNIMDFAMPYFIQVMREYLSKVDELMEKPTD
QLVKSKAISVDKLDASDSLRKDEDQVAEPAPLVFGQQLMLTAGSTAVPPQPGYAYGYPAG
YAQPAYGFNM
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatacttcccatccgcttccaggagcacctgcagctccaaaaccaaggtgtg
aatcctgccaatattggattcagtactcttaccatggaatccgacaagttcatctgcatc
agggagaaagtgggagaacaggcacaagtagtggtgattgatctgaatgatccagcaaat
ccgattcggcgtccaatatctgctgacagtgtcatcatgaacccagcaagcaaagtgatt
gcactgaaagatgctggcaaaaccctacaaatatttaacattgaaatgaagagcaaagtg
aaagctcataatatggttgaagaagtcacattctggaaatggatttctttaaacactgtt
gccctagtaactgagactgcagtattccattggagcatggaaggtgactctcagccacag
aagatgtttgataggcatgccagcttggctggctgtcaaatcattaactacaggacagac
cttcagcagaagtggttgcttctaattggaatttctgcgcagcaaaacagggtggttggt
gcgatgcagctgtactctgtggacaggaaggtgtcccaaccgattgagggacatgctgca
gcttttgctgacttcaaattggaagagaatcccacacagtcaacgctcttttgctttgca
gttcgtagtcaagcaggaggaaagttacatataatagaagtaggtcagccagctgctgga
aaccagccttttacaaagagagcagtggatgtgtttttccctccggaggcccaaactgac
tttccagtagcaatgcaaattggaacaaaatatggggttatatatctcattaccaaatat
ggctacatccacttgtatgacttggaatctggtgcttgtatctacatgaaccgtattagt
gctgagaccatttttgtgactgctccccatgaacctacatctggcatcattggagtcaat
aaaaaaggccaagtattatctgtttgtgtggaagaagagaatattgtaaactatgcaact
aatgtgctccaaaacccagaccttgctctccgaatggctgtgagaagcaaccttgctggt
gctgaggagctctttgcacgaaagtttaacactttattcgcacaaggaaattatgctgaa
gctgctaaagttgctgcatcagcaccaaagggtattctacggactccagacacaattaga
aaattccagacagtcccggcccagccagggcaagcttcacctcttctgcagtattttggg
atactccttgatcagggacaattgaacaagtatgaatcactggaactctgccgtcctgtc
ttgcaacaaggccgcaagcaactgctggaaaaatggctgaaggaagataagttggagtgt
tctgaggaactgggagacttggtgaagacagctgatcccacactagctttaagtgtctat
ctccgtgccaatgtgccaaataaagttatacagtgttttgcagaaactggacaattccag
aaaattgttctgtatgcgaaaaaggttggttacactccagactgggtcttcctgctgaga
aatgttatgcgagtgagccctgaccaaggacttcagtttgcacagatgcttgtccaggat
gaagaacccctagctaatattaatcagattgtggatgtatttatggaaaataacctgatc
cagcagtgtacatctttcctattagatgcgttgaagaataacaggccttctgagggtcac
ttacaaacacgccttcttgaaatgaatctgatccatgcaccgcaggtggctgatgcaatc
ctaggaaaccagatgttcactcactatgatcgtgcccatattgcccagctatgtgaaaaa
gctggcttgttgcaaagggctttggagcactatacagatttgtatgatatcaaacgtgct
gttgtacacactcaccttttgaaccctgagtggctggtgaacttctttggtgcactctct
gtagaagattcccttgagtgcttgcgtgccatgttgtcagctaacatccgccagaatctg
cagctttgtgtgcaagtagcatccaagtaccatgagcagcttggcactcagtcattggtg
gaactttttgaatcctttaagagttatgaggggttattttatttccttggatccattgtg
aatttcagtcaggagcctgatgttcacttcaagtatattcaggcagcatgtaaaactgga
caaattaaagaagttgagcgtatatgccgtgagagcaactgctatgattcagaacgtgtg
aagaatttcctgaaggaagccaaactgacagaccaacttcccttaatcattgtgtgtgac
cgatttgactttgtccatgaccttgttctgtacctgtatcgcaacaacctgcagaaatac
attgaaatctatgtccagaaggtgaatcccagcaggcttccagtagtggtaggtggacta
ctggatgtggattgctctgaagaagttatcaaaaatcttatcactgtagtccgtggacag
ttctcaactgacgagcttgtgagcgaagtagagaaaagaaaccgattgaaattgctgctt
ccctggctggaggctagaattcatgaaggctgtgaagagcctgctactcacaatgcttta
gctaaaatttatatcgatagcaataacaatcctgagcgttttctgcgtgagaaccccttc
tatgatagctcagtggttggcaagtactgtgaaaagagggatccgcatttggcttgtgtg
gcttatgagcgaggccagtgtgatttggatctcatcaaggtttgcaatgagaactctcta
ttcaagagtgaggctcgttatcttgtacgtagaaaagatccacagctttgggccaatgtt
cttgaagaaaataatccttttagacgccagctgattgaccaggttgtccaaacagccctg
tctgaaacccaggatccagaagaagtatctgtcactgtgaaagcctttatgactgctgac
ctccccaatgagctgattgaattgcttgagaagatagtcttggataacaatgtctttagt
gaacataggaatctacagaacctcttgattcttactgctattaaagcagatcgcacccgt
gttatggagtacattaatcgtctcgacaactacgatgctcctgatattgcgaacattgcc
atcagtaatgagctttttgaagaagcatttgcaatctttcgaaagtttgacgtgaacact
tctgctgtgcaggttctgattgaccacattggcaatctcgatcgtgcttatgaatttgca
gaacgttgtaatgagccagcagtatggagtcagctggcaagagcacaattacagaaggat
ttggttaaagaagccatcgattcctacatcaaggctgatgatccttctgcctatatggag
gttgtgaaagcagccaacaaaaacaataactgggaagacctggtgaaatttctgcaaatg
gctaggaagaaagccaaagagtcatatgtggagactgagttgatatttgctctggcaaag
accaaccgtttgtctgaactggaggaatttgttaatggacccaacaatgcccacattcaa
caagttggtgatcgctgttatgatgatggcatgtatgatgcagcaaaattactttacaac
aatgtgtccaacttcgctcgcttggcttccactctggtacatctaggcgagtaccaagct
gctgtggacagtgctcgcaaagctaacagcaccagaacttggaaagaggtttgttttgcc
tgtgttgatggccaagaattccgtctagcccagatatgtggcctacacattgtcatccat
gcagatgaacttgaggagttgatcagttactaccaggatcgagggtattttgaggaactg
atctctctcttggaagcagcattgggcttggaacgggctcacatgggaatgttcacagag
ctggcaatactatactccaaattcaaaccacaaaagatgagagaacacttagaacttttc
tggtccagggtcaatattccgaaggtccttcgtgcagcagagcaggcgcacctttgggct
gagctggtcttcctttatgataaatatgaagagtatgacaatgcagtcataactatgatg
agtcacccaacagatgcttggaaggaagggcagtataaagatataatcgcaaaggttgct
aatgtagagttgtattacaaggccctgcagttctacttggattacaaaccactgttgatc
aatgatctgttaatggtgctatcaccacgtttagaccataccagggcagtcactttcttc
agtaaggtgaaccaattgcctctaataaaaccatatttacgctctgttcaaaatcacaat
aataaagctgtgaatgaagctctgaacaacctgcttactgaagaggaggattatcagggt
ttgcgtacatctattgacgcatatgataactttgacaacattatccttgctcagcgcctg
gaaaagcatgagctaattgagtttaggcgtattgctgcttatctctacaaaggtaacaat
cgctggaaacaaagtgtggaactctgcaaaaaagactgtttgtacaaggatgcaatgcaa
tatacagctgaatccaaggacactgagctttctgagaaacttctgcaatggttcctggaa
gagggcaagcaagagtgttttgcgtcctgcttattcacatgctatgatttgttacggcca
gatgtggttcttgagctgtcatggagacacaacatcatggactttgcaatgccatatttt
attcaagttatgagggaatatctcagcaaagttgatgaactaatggaaaagccaactgat
caactggttaaatccaaagcaatatcggttgataaacttgatgcttcagatagcttgaga
aaagatgaagaccaagtggctgaaccagctcctctagtatttggtcagcagttaatgttg
acagcaggttccactgcagtccctcctcagcctggctatgcttatggttatccagctggc
tatgctcagcctgcttatggcttcaacatgtag
DBGET
integrated database retrieval system
