Chiloscyllium plagiosum (whitespotted bambooshark): 122562525
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Entry
122562525 CDS
T08871
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122562525 (arvcfb)
Spliceosome [BR:
cpla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122562525 (arvcfb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Atx10homo_assoc
Cnd1
Motif
Other DBs
NCBI-GeneID:
122562525
NCBI-ProteinID:
XP_043571337
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All DBs
Position
25:complement(4957222..5273086)
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AA seq
984 aa
AA seq
DB search
MDDYDVRSAASILASVKEQEARFEKLTRALEEERRNVSMQLERVTVPSERSSISNMDNNE
SFAWQQLVLQEQSPSNLTSKKTMQEPQELVEETVTVEEDPGTPTSHVSVVTSDDGTIRRT
ETKVTKVVKTVTTRTVRQVPLGPDGLPAEGSSPAGSCTDSIDRRYMKNGDRYITPQANST
LTRGYTNYPDAYENRHDMYRSYTGQDGFADVSDNYGSLSRGVHYRPRYAFVPRDNYRPDE
NYTLLGRNKYAVAQPQVQPDGSVDLSRSQPERFQPEPYGLEDDHRSLGPDDDGYELDGEP
EPDYSTASRRVPTRANGRRPRRGYEDPIEAEIIEDRIPYLPGVYNAPLAQPERGSMASLD
RLGRHSPSIDSIRKDPRWRDPDLPEVIAMLSHHLDPVKSNAAAYLQHLCYENDKIKKEVR
QLKGIPILVGLLDHPKPDVHRRACGALRNISYGKDHDSKVAIKNCDGIPALIRLLRKTND
MEVRELITGTLWNLSSYEPLKIVIINHGLQTLTNEVIIPHSGWENEPNEDSKPRDAEWTT
VFKNTSGCLRNVSSDGSDARRRLRECEGLVDALLHALQSAVGKKDMDRKSVENCVCIMRN
LSYQVHREVPGADKFREPVTDQQTGTGSAQKKKKDDSGCFGGKKAKEEWFNQGKRNADAD
KNFDTLDLPKRTEPVQGYELLYQPEVVRLYLSLLTESRNYNTLEAAAGALQNLSAGQWTW
SNYIRSTVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSVDGRNKDLIGNYAMHDLVSN
LTGGQQRPAKNLEEDTIVAILNTIHEIVTDSSSNARSLIQAQGIEKLVAINKSSQSVREM
KAAAHVLQTVWSYKELRNALHKDGWNKSHFQPNVTTLPKGSKSGSKAIGYDDSTLPLIER
NQKDGNKWSGEMIPMEQFGPDTYSTLDQREKERKCKTMDVSADAFEQQPLRNDSNKKNIN
RISRASVNLVDANDTKPQPVDSWV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatgatgtaagatctgctgctagcattctagcttcagttaaagaacaggag
gcccggtttgaaaagttgaccagagcgcttgaggaagagcgtcgcaatgtttccatgcaa
cttgaacgtgtcactgttccctcagaaagatcgagtatatccaacatggacaacaatgag
tcatttgcatggcagcagctagttttacaggaacaaagccccagtaatctaacttcaaag
aaaacgatgcaggagccgcaggagttggtggaagaaactgttacagttgaagaggaccca
ggcactcccacctctcatgtatctgtggtaacatcagatgatggaactataagacggact
gaaacaaaggttactaaagtggttaaaactgtgacaactcgaaccgttcggcaggtgcca
cttgggccagatggattgcctgcagaggggtcttctcctgctggcagttgtacagattct
attgacagaagatacatgaaaaatggagaccgttatattacaccacaagcaaattctact
ttaaccagaggctataccaactatcccgatgcatacgagaatcgccatgatatgtaccgt
tcatacactggtcaggatggatttgctgatgtatctgataactatggaagcctatcacga
ggtgtacattaccgcccacgctatgcttttgtgccacgagacaactataggccagatgag
aattacacattgctgggtagaaacaagtatgctgttgcccaaccgcaagtgcagccagat
ggcagtgttgacctgagccgatctcaaccagagcgtttccaaccagaaccttatggactt
gaagatgaccacagaagtctaggacccgatgatgatggatatgaattagatggggagcca
gaacctgattattccaccgcaagtcgaagggtgccgacacgagctaatggaagaagacca
aggagaggttacgaagatcctattgaagcagagatcattgaagatcggattccatatctg
ccaggagtgtacaatgcgccactagctcagccagaaaggggaagcatggccagcctagac
cgacttggaagacactcaccatcaatagacagcatccggaaagaccctaggtggcgggac
cctgatcttccagaggttattgcaatgctcagtcatcaccttgaccctgttaagtcaaat
gctgctgcctacctgcagcatttgtgctacgaaaatgacaaaattaaaaaggaagttcgg
caattgaagggtatacctattttggttggacttctggatcatccaaaaccagatgtccat
cggagagcctgtggtgctctgagaaatatctcgtatggtaaagatcatgacagtaaagtt
gcaattaagaattgtgatggaattcctgctctcattcgattgctcaggaagaccaatgac
atggaagtcagagaactaattacaggtacattgtggaatttatcatcatatgaaccactg
aaaattgtgattatcaatcatggccttcagactctaacaaatgaggtcattattcctcat
tcgggatgggagaatgagcccaatgaggattctaagccacgtgatgctgaatggacaaca
gtcttcaaaaacacatctggatgtctaagaaatgttagttccgatggaagtgacgcccgt
agaagactccgggaatgcgagggcttggtagatgcactcctgcacgcactgcaatcagca
gtgggcaagaaagacatggaccgaaagtcagttgagaattgtgtatgcattatgagaaac
ctctcctatcaagtgcatagagaagtacctggagctgataaattcagagaaccagtaact
gaccaacaaactggaacaggaagcgctcagaagaagaaaaaagatgattctggttgcttt
ggtggaaagaaggcaaaagaggaatggtttaatcaaggtaaaagaaatgcagatgctgac
aaaaattttgatactttggacttgccaaagcgtacagaaccagtgcaaggctatgagctc
ctctaccagcccgaggtggttcgactctacttgtccttgctcacagaaagtcgaaattac
aacacgttggaggcagcagcaggtgctctccagaacctaagtgctgggcagtggacgtgg
tccaattacattcgttcaactgtgcggaaagaaaaaggcctccctattttggtagagctg
ctgagatcagattctgataaagttgtacgagctgtggcaatcgcattacgaaatctttct
gtggatgggcgcaataaggacctcattggtaattatgcgatgcatgatttggtaagtaat
ctaacaggtggtcaacaaagacctgccaagaaccttgaagaagacacaatagttgcaata
ctcaacactatccatgaaattgttactgacagttcatcaaatgccagatccttgattcaa
gcacagggcattgagaagcttgttgcaatcaacaaatccagccagtcagtaagggagatg
aaagctgcagctcatgttttgcaaacagtttggagttacaaagagttgagaaatgcattg
cataaagacggctggaacaagtcccattttcagcctaatgtgactacacttcccaaggga
tccaagagtggtagcaaagcaattggctatgatgacagcactctcccattaattgaaagg
aaccagaaagatggtaataaatggtctggcgaaatgattcccatggaacagtttggccca
gatacttactctaccttggatcagagggagaaagagcgcaagtgtaagactatggatgtt
tctgcagatgcttttgaacagcaacctttgcggaatgattcaaataagaaaaacattaac
aggattagtagggcctcagtgaatcttgtggatgctaatgacacaaaacctcaacctgtt
gactcctgggtctaa
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