Chiloscyllium plagiosum (whitespotted bambooshark): 122562589
Help
Entry
122562589 CDS
T08871
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla02010
ABC transporters
cpla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122562589
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122562589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122562589
Transporters [BR:
cpla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122562589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
122562589
NCBI-ProteinID:
XP_043571491
LinkDB
All DBs
Position
2:108266977..108382927
Genome browser
AA seq
2204 aa
AA seq
DB search
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFDKSIISRLFYDAKKILLYSQTDG
NMGAFHNLFEALKKFSNSTSDLRLRDFLVENETLSEFLYQDMSFDHDAVEQILDAHVNFG
KVITEGQGLQLKDLCDGPKLKDFVIIGDHSTATYTQSLICTLSEAELKKVELTFFLNLDI
LKLIQKGLITNPKEALNVTEALDEVLQNLMILAKELMEVKSWTDMRREMMLLTNENTTGS
PQEVYQAVTRIVCGHPEGGGLKIKSLNWYEDNNYKYLLGRNGTDDDDAAHYDNSTTPYCN
DLMRNLESNPISKMIWRVMKPLLVGKVLYTPDTPVTRRIVQEVNETFQELSVFKEIGEMW
KEIGPKIWVFMERSQAMDLIRSLLKKHVTAKYIDSKLDGTSWSAADLSKFLAKYPEEVQH
PNGSTYTWREVYNETEQAIHKISLAMECVKWDKLEAVSTEEKLINKSMELLDERKFWAGI
VFLDFDSNSTKPTEHIKYKIRMDIDNVERTNKIMDGYWDPGPRADPFEDLRYIWGGFSYL
QDIIEHAIIRTVTGRKEKTGVYIQQMPYPCYVDDLFLRVLSQSLPLFTTLAWIYSVAVII
KGIVYEKEARLKETMRIMGLNSGTLWFSWFISSLIPLLISAALLVVILKEGNILPYSNPI
AVFTFLAVFGVVTILQCFLISTMFSKANLAAACGGIIYFTLYLPYVLCMAWQEYTTYSIK
IIASLLSPVAFGFGFDYFAQFEEQGIGVQWHNLFSSPSKGDEYNITTSIILMIIDTFLYG
VLTWYIEAVFPGQYGIPKPWYFPFTKSYWCGDTIQNIKQTPSAKNTNSQICVEEEPSHLR
LGVSIQNLVKIYRNGKKLAVDGLSLSFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYILGKDICSDLDSIRQSLGVCPQHNVLFDLLTVEEHVWFYARLKGLSRSEVKTEVEQMV
LDVGLPNKRKETTNKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLLK
YRQGRTIILSTHHMDEADMLGDRIAIISNGKLCCCGSSLYLKNQLGTGYYLTLVKKDLEP
SLSSCRNSSSTMSYLKKDDSVSQSSSDAGLGSDQESDTITIDVSAISNLILKHIPKARLV
EDIGHELTYVLPYEAAKDGAFVELFHEIDDRLSDLGISSYGISDTTLEEIFLKVAEDNGV
DTETSDGMIPACRNRRSRFVDRQSCLRPFTDDAADVNDSDGDPEARETDFLSGMDGKGSY
SVRGWNLFRQQFVALFWKRLIYAKRSRKGIFAQIVLPAVFVCIALVFSLIVPPFGKYPSL
ELHPWMYDEQYTFISNDAPGNEHTEKLLNSLVNKPGFGNRCMKGSPILDNPCKPAAAEWI
TPSVSDSIMDVFLNGNWTMDNPSPTCRCSDNTIKKMLPDCPAAAGGLPPPQIKLNSTDIL
QNLSGRNVSDYLVKTYAQIIGRSLKNKMWVNEFRYGGFSLGGESSPLLPPQEEVTQAILH
LKKALALTQGSASDRFMSRLLKFMSGLDTKDNVKIWFNNKGWHAIGAFLNVMNNAILRTR
LGEGEDPSAYGITAINHPLNLTKEQISEVALMTTSVDVLVSICVIFAMSFVPASFVVFLI
QERVTKAKHMQFISGVKPAIYWLANYVWDMCNYVVPATLVIIIFICFQQKSYVSSSNLPV
LALLLFLYGWSITPLMYPASFVFRIPSTAYVILTSVNLFIGINGSVATFVLELFSNNKLN
SINEVLKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMA
VEGVVFFFITVLIQYRFFIKPRPTSVKLPVLTDEDEDVAKERQRVLSGGCQNDILELKSL
TKIYRMKRNPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDSYVTGGEAFLNGYSI
LSNMQEVHQNMGYCPQFDAINELLTGREHLELYGLLRGIPEKEICKVAEWGIRKLGIIRY
ADKRAGNYSGGNKRKLSTAMALLGGPPVLFLDEPTTGMDPKARRFLWNTILSIVKEGRSV
VLTSHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIIVRIVGPNPDLSPVEQ
FFKRAFPGSILKEKHRNMLQYQLPSYQSSLSRIFSILSSNKEKLQIEDYSVSQTTLDQVF
VNFAKDQSDDDLSKDMSIQRNETVLDVALLNTFLHDNSVKESCV
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgctgggactctgccgtggattcaaggaattatttgtaatgcaaacaacccc
tgtttccgctacccaacaccaggtgaatccccaggagtggttggaaattttgataaatcg
ataatctctcgcctgttttatgatgccaagaagattcttctgtacagccaaacagatggc
aacatgggagcctttcacaacctgtttgaagcactaaagaaattcagcaattctacttca
gatcttaggctccgggatttcttggttgagaatgagacgctgtcggaatttctgtatcaa
gatatgtcatttgaccatgatgcagtggagcagatcctagatgctcacgtaaattttgga
aaggtcattacagaggggcaaggattacagctgaaggacctttgtgatggcccaaaactg
aaggactttgttatcattggagatcactccacagccacttacacccaatctcttatttgt
accttatcagaggcagaactgaaaaaagtcgaactaacattctttttgaacctggatatt
ttaaagttaatacaaaaaggattgatcactaatcctaaagaagcattgaatgtaactgaa
gccttggatgaagttctgcaaaatctcatgattctagccaaagagctaatggaagtgaag
agttggactgacatgcgaagagagatgatgttactgaccaatgagaatacgacagggtca
ccccaagaggtgtaccaagccgtgacaagaattgtgtgtggccatcccgaaggtggtgga
ttaaagatcaagtccctgaattggtatgaggacaacaactacaagtatcttttgggtaga
aatggcacggacgatgatgatgccgcacactatgacaactcaacaacgccatactgcaat
gacctgatgaggaacttggaatccaatcccatctctaaaatgatctggagggtaatgaaa
ccattgctggttggtaaagtgctgtacactcctgatacccctgtgactcgaagaattgtt
caggaggttaatgagacctttcaagagctgagtgtcttcaaagagattggagagatgtgg
aaagagattggaccaaagatctgggtgtttatggaaagaagtcaggcaatggatttgatt
cgaagcctactaaagaagcatgttacagcaaagtacattgattcaaagctagacggaacc
tcttggtcagccgctgatctctccaagtttcttgccaaatacccagaagaggttcaacat
ccaaacgggtccacgtacacctggagagaggtttacaatgagaccgaacaggcaattcac
aaaatatcactcgctatggagtgcgtaaagtgggataaattagaggctgtgtccactgag
gagaaactgataaacaaatcaatggagctgctggatgaaaggaagttctgggcgggaatt
gtcttcctggactttgattcaaacagtacaaaaccaacagagcacatcaagtacaaaatt
cggatggatatagacaacgtggagagaacaaacaagatcatggacgggtattgggatcct
ggacctcgtgctgacccatttgaagacctccgttatatttggggtggcttctcgtacctc
caggatataatagagcatgcaatcatccgcaccgtgaccgggaggaaggagaaaactggc
gtgtacattcagcaaatgccatacccctgctacgtggatgatctatttcttcgcgttctg
agccagtcactacctctcttcaccactctggcctggatctactctgtcgctgtgataatt
aaagggatagtatatgagaaagaagcacgccttaaggagaccatgaggattatgggtctg
aatagtggcacactgtggttcagctggttcatcagcagtttaatccctctactcatcagt
gctgccttgctggtggtaattctaaaggaaggaaacatattgccttacagcaaccccatt
gctgtcttcacattccttgcggtttttggtgtggtcaccatcttgcaatgctttttgatc
agcaccatgttttcaaaggctaacctagcagcagcctgtggagggattatctactttacc
ctgtaccttccttatgtcctctgtatggcttggcaggagtatacgacctactcaatcaaa
atcattgccagcctgctctccccagtcgcctttggctttggttttgactactttgctcaa
ttcgaagagcagggaattggggtccagtggcataacctcttctcgagtccatcgaaaggc
gatgagtacaacatcaccacatccatcatcctcatgatcattgacacattcctgtacgga
gttctaacttggtacattgaggcagttttcccaggacaatatggcattcccaagccatgg
tattttccttttaccaaatcctattggtgtggagatacaattcagaacattaagcagact
ccatctgctaagaatacaaattcacaaatctgtgtggaagaggagccgagtcacctcaga
cttggtgtctccattcaaaacctggtcaagatttaccgtaatggcaagaagctggcagtg
gatggactcagtctcagcttttacgaagggcagatcacatctttcctaggacataatgga
gctggcaaaaccactactatgtcaatattgacaggattgtttccaccaacatctggaaca
gcttacattctgggaaaagatatctgttctgacctcgattccattcggcaaagcctgggt
gtgtgcccacagcacaatgtcctttttgatttgcttactgtagaggaacatgtttggttt
tatgcacgactaaaaggattgtcaaggagtgaggtgaagacagaggtggagcagatggtc
ttggatgtggggctgcccaacaaacgtaaagaaacaaccaacaagctttcaggcggaatg
caacgaaaactttcagtagcccttgcatttgttggtggctcgaaagttgtcatcttggat
gaaccaactgctggagttgacccttattcccgccgagggatatgggatctgctgctgaaa
tatcggcaaggtcggaccattatcctctctacacatcatatggatgaggcagatatgctg
ggagaccggattgccattatttctaatggcaagctatgctgttgtggatcatcattgtac
ctaaagaaccagttaggaacaggctactacctcactctggtcaagaaagatttagagcca
tctctcagctcctgtagaaacagcagcagcaccatgtcctacttaaaaaaggatgacagt
gtttctcaaagcagctctgatgctgggcttggcagtgatcaagaaagtgataccatcact
atagatgtttcagccatttccaatctcatcttgaaacacattccaaaggctcgcttggtt
gaagatattggccatgaactgacatatgtgctgccttatgaggctgctaaagatggggct
tttgtggaacttttccatgagattgatgacagactctctgaccttggaatttccagttat
ggaatttccgacactactctggaagaaattttccttaaggttgctgaggataacggagtg
gatacggaaacgtcagatggcatgattccagcttgccgaaaccggagatcgagatttgtg
gacagacagagttgcttgagaccgttcactgatgatgctgctgacgttaatgactcggat
ggtgatccagaggcccgtgaaacggacttcctgagtggaatggatgggaaaggttcttac
tcagtaagaggctggaacctttttaggcagcagtttgtggcattgttctggaagaggtta
atttatgcaaaacgcagccggaaaggaatctttgctcagatcgtactacctgctgtgttt
gtgtgtattgcactggtgttcagtctgattgtgcctccatttggtaaatatcccagctta
gaactgcacccctggatgtatgatgaacagtatactttcattagtaatgatgctcccgga
aatgagcacacagaaaaactgctcaactctcttgttaataagccagggttcggcaatcgg
tgtatgaaaggaagtcccattcttgataatccctgtaagcctgcagctgcagagtggatc
actccttctgtttcggattctataatggatgtctttctcaatgggaattggacaatggat
aatccttcaccaacctgtcggtgtagtgataatactataaagaagatgcttcctgactgt
cctgcagctgctggtggacttccacctcctcagattaaactgaattccacagacatcctc
cagaacctgtccggcagaaatgtgtccgattaccttgtgaaaacctatgctcaaatcatt
gggagaagtttaaagaacaaaatgtgggtgaatgaattcaggtatggaggattttcactt
gggggagaaagctctccgttgcttccaccacaggaagaagtcactcaagccatactccat
ttaaaaaaggcacttgcattgacacagggtagtgcttctgaccgctttatgagccggctc
ttgaaatttatgtcaggattagacacgaaagataatgtaaagatttggtttaacaacaaa
ggttggcatgccattggagccttcctgaatgtcatgaacaatgctattctccgtactcgg
ttaggggaaggtgaagatcccagtgcatacggaatcaccgccatcaatcatcccctcaat
ctgaccaaagagcagatctctgaggtggctctgatgaccacttccgtggatgttctcgtt
tctatctgtgtgatctttgccatgtccttcgtgccggcaagttttgttgttttcctgatt
caggagcgggtcaccaaagccaagcatatgcagttcatcagcggagtgaaaccagccatc
tactggctagctaactatgtgtgggacatgtgcaactatgtggttcctgccactctggtc
attattatatttatctgtttccaacaaaaatcatatgtgtcttcctcgaatctgcccgtg
ctggctctgcttctcttcctctatggatggtccatcacacctttgatgtacccagcatca
tttgtgttcaggatccccagcactgcctatgtgatactaaccagcgttaatttgttcatt
ggtattaatggcagtgtggcaactttcgtattggagctgtttagcaacaataaactgaat
agcattaacgaagtcctgaaatctgtgttcctcatctttccccacttctgtttgggccgt
gggttgattgacatggtgaaaaatcaggccatggcagatgccttagaacgatttggcgag
aatcgttttgtctccccgctttcctgggatctagtaggaaggaacctgtttgctatggct
gtggaaggagtggttttctttttcatcactgttctgattcagtacagattctttataaaa
ccaaggcccacatctgtaaaacttccagttctaactgatgaagacgaggatgtggccaag
gaaaggcagagggtcctgagtggtggatgtcaaaatgacatcctggaactgaaaagcctg
acaaagatttacaggatgaaaaggaaccctgcagtggacagactctgtgttggaattcca
ccaggagagtgttttgggctgcttggggtgaatggtgctgggaaaacaaccaccttcaaa
atgttgaccggagatagttatgtgacaggaggagaagctttccttaatggctacagtatt
ttatctaacatgcaagaagtccaccagaacatgggttactgtcctcagtttgatgccatc
aatgagcttctcactggccgggaacatctagagctatatggactcctgcgtggaattcct
gagaaagagatttgcaaggttgctgaatggggaatccgaaagctgggaattattcgatat
gcagacaaaagggctggcaactacagcggtggcaacaagcgcaaactctcaaccgctatg
gctctgcttgggggtcctcctgtattatttctggatgaacccacaacagggatggaccca
aaagctcggagatttctgtggaacacaattcttagtattgtgaaagaagggagatcagtg
gtcttgacgtcacacagcatggaagagtgtgaggctttgtgtactcgaatggccataatg
gtgaatggcaaatttcgatgtcttggcagtgtgcagcatctcaaaaacagatttggagat
ggctacacgataattgtgaggatagttggtccaaacccagatctgagtcctgtggagcag
ttcttcaagcgggcttttcctggcagcattctcaaggagaagcaccgcaatatgctgcag
taccagctgccatcctatcaatcctccttatcgaggatctttagtattctctccagcaac
aaggagaaacttcaaattgaggactactctgtttcacaaaccacactagaccaagttttt
gtaaattttgccaaggaccaaagtgacgatgacctctcgaaagacatgtctattcaaaga
aatgaaactgtcttagatgttgcactcctgaatacatttttacatgacaacagtgtgaag
gaaagctgtgtgtga
DBGET
integrated database retrieval system
