Chiloscyllium plagiosum (whitespotted bambooshark): 122562618
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Entry
122562618 CDS
T08871
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122562618 (tfip11)
Spliceosome [BR:
cpla03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122562618 (tfip11)
Other components
Complex C specific factors
122562618 (tfip11)
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF1281
Motif
Other DBs
NCBI-GeneID:
122562618
NCBI-ProteinID:
XP_043571541
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Position
25:17423428..17458161
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AA seq
830 aa
AA seq
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MSMSHLYGKGQDDDEVEMERFEISDWDLENEFNPDRVRHRQTKEDAIYGMWAENDSDDER
PSFGGKRSKDYSAPVNFISAGIRRPAAEENAEDKDSDDSEEEKVKREDFPKEFAPKKLKT
GGFFKSSSKGFTGGHRTNQEIGTWEKHTKGIGQKLLQKMGYVPGRGLGKNAQGIVAPIEA
KMRKGKGAIGAYGSERTEQSLKDFPIVDSDEEAEEEFQKEMSQWRKDPAGGKKKPKYTFK
TVEELKAKGASALGKKMATPQTELSQVKVIDMTGKEQKVYYSYSQMNQKHDIPDDTQSPV
KDAKSEGFSLPELEHNLQLLIEMTEQEIIQNDRQLQYERDMVVNLSHENEKLSEILAHED
KIIDKLSSILQIVEDCEKRLQPNCENPLTLEECAKIFEMLQEKYFEEYKMFDLAELSIAI
VFPLLKEFFKTWNPLQDNTYGLDVMSKWRKLLERDQLQHGGCDMLSLDPYHRLMWEVWMP
CVRNVVSQWLPRNCAPMVDFLENWMPAVPLWILDNILEQLIFPKLQREVENWNPLTDTVP
IHAWIHPWLPLMQMRLEPLYSPIRNKLSNALQKWHPSDSSAKLILLPWKNVFTPGSWDAF
MQKNIVPKLGMCLTEFVINPHQQHMDTFHWVMDWEDMISASSLIGLLEKNFFPKWLQVLC
SWLSNSPNYEEVTKWYLGWKSMFSDQVLAHPTIKEKFNEALDIMNRAVTSTVGGYMQPGA
RENIAYLTHTERRRDFQYEAMQERREAENLAHRGIGVSSASIPMNFKDLIQAKAEEHNIV
FMPLMGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcacatctttacgggaaaggccaggatgacgacgaggtggagatggagcgg
tttgaaatttcagattgggacttggaaaatgagttcaacccagaccgtgtacgccatcgg
cagacaaaagaggatgccatctacggcatgtgggctgagaatgattctgatgatgaaagg
ccaagctttgggggaaaacgttccaaagattacagtgctccagtgaatttcatcagtgct
gggatccggcgacctgcagctgaggaaaatgcagaagataaggattctgatgattctgaa
gaagagaaagttaaacgagaagattttccaaaggaattcgccccaaagaaattgaaaact
ggtggctttttcaaatctagttcaaaaggattcacaggaggacatcgaacaaaccaggaa
attggcacctgggaaaaacataccaaagggattggacagaaattactgcagaagatgggt
tacgtacctggcagaggtcttgggaaaaatgcacaaggaattgtggcaccaattgaagca
aaaatgagaaaggggaaaggagcaattggtgcttatgggtctgaacgaacagagcagtca
ctgaaggattttcctattgtcgattccgatgaagaagcagaagaggagtttcagaaggag
atgagccagtggcggaaggatcctgcaggtgggaagaaaaaacccaaatataccttcaag
actgttgaagagcttaaagcaaaaggagcatctgctttgggcaagaaaatggctacacca
cagacggagctctcacaagtaaaggttatagacatgacaggaaaggagcagaaagtctat
tacagttacagccagatgaaccagaagcatgatattcctgatgacacacagtctccagtt
aaagatgcaaagtcagaaggcttttctctccctgagctggaacacaatctgcaactgctc
attgaaatgaccgagcaggagatcatccagaatgaccgtcagctgcagtatgagagggac
atggttgttaacctctcccatgagaatgagaagctgtctgaaatccttgcccatgaggat
aagatcatagacaagctcagcagcatcttgcagattgtggaggactgcgagaagagactg
cagcccaactgtgaaaatccactgaccctggaggagtgtgcaaaaatttttgaaatgctc
caggagaaatattttgaggaatacaagatgtttgacttagcagaactctccattgccata
gtatttccactgctgaaagaattctttaagacatggaatcctttgcaggataacacgtat
ggtttagatgtcatgtctaaatggaggaaacttctagaacgagatcagctgcagcatgga
ggatgtgacatgttgtcgttggacccttaccacaggttgatgtgggaggtatggatgcca
tgtgtccgtaatgttgtatcccagtggctgccccggaattgtgctccaatggtggatttc
ttggagaactggatgcctgcagtacctctctggatattggacaatattcttgaacagctg
atttttcccaagttgcagcgtgaggttgagaactggaatccactgacggacacagtccca
atccatgcctggattcacccctggcttccattgatgcagatgcgcctggagcctctgtat
tcgccaatccgcaacaagctttccaatgcattgcagaaatggcatcccagtgactcgtct
gcaaaactgatcctattgccatggaaaaatgtgttcacaccaggatcctgggacgccttc
atgcagaaaaatattgttccaaagttagggatgtgtttgacggagtttgtgattaatcct
caccaacaacacatggacacgttccattgggtgatggactgggaggacatgatctcagct
tccagcctcataggattgcttgagaaaaactttttcccaaagtggttacaggtgctgtgt
tcttggctgagtaatagtcccaattatgaagaggtcactaaatggtatttgggatggaag
tccatgttttctgaccaggtattggcccaccccacaatcaaggagaagttcaatgaagct
ctggacattatgaaccgggctgtcacctccacagttggtggttacatgcagccaggagct
cgggagaacattgcctatcttacccacacagagcgccggagagactttcagtacgaggca
atgcaggagcgccgtgaggcggagaatctggcacaccgtggcattggggtcagctctgcc
tccataccaatgaacttcaaagacttgatccaggcaaaggctgaagagcacaatattgtc
ttcatgcccttgatggggaaacgtcatgagggcaaacagctctacacctttggtcggata
gttatttacattgacagaggggttgtatttgtgcagggggagaaaacctgggtgccaaca
tcacttcagagcctcattgacatggctaaataa
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