Chiloscyllium plagiosum (whitespotted bambooshark): 122562620
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Entry
122562620 CDS
T08871
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122562620 (ttc28)
Cilium and associated proteins [BR:
cpla03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
122562620 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_14
Rapsyn_N
TPR_17
TPR_BSK1_C
TPR_9
TPR_11
TPR_NPHP3
PUB
TPR_19
ANAPC5
Motif
Other DBs
NCBI-GeneID:
122562620
NCBI-ProteinID:
XP_043571547
LinkDB
All DBs
Position
25:17465759..18211002
Genome browser
AA seq
2498 aa
AA seq
DB search
MEADSKREKSSVFEESLMRRISGSSSVHTLSKAAFIEKVRESNAACQSGDFTTGVQLYTE
AIAADPQNCILYSNRSAVLVKLNEYEKALDDAVKARLLNPKWSKAYFRQGVALQYLGRHA
DALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQKLQKMKLDKSPFVVVSVIG
QELLTAGHHSASVVVLEAALKIGTCSLKLRGSVFSALSSAYWALGNTEKSIGYMQQDFDV
AKTLGDHTGECRAHGNLGSAFFSSGNYREALNNHRLQLVLAMKLKDREAASSALSSLGHV
YTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLRI
AKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHNHVLELAQDLDEKAIEMRAYAGLGHA
ARCMQDLERAKQYHEQQLNIAENLKDRAAEGRASSNLGIIHQMKGDYESALKLHKTHLSI
AQELNDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVA
YQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEFIQAVPYYEQYLRL
SPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLA
FKALGNYAKAEESQKYVLSLAQSLNNSQAKFRALGNLGDIFVCKKDVNGAVKFYEQQLTL
AHQVKDRKLEASAYAALGTAYRLIQKYDKALGYHTQELEVYQELSDLLGECKAHGHLAAV
YMALGKYTMAFKCYEEQLELGQKLKNPNIEAQVYGNMGITKMNMNVMEDAIGYFEQQLAT
LQQLSGNDAVLDRGHAYGNLGDCYEALGDYEEAVKYHEQYLSVAQSLNRMQEQARAYRGL
GNGHRAMGNLQQALVCFEKRLVVAHELGESSNKAQAYGELGSLHSQLGNYEQAISCLERQ
LNIAREMKNRILESDAACGLGGVYQQMAEYETSLQYHQLDLEIAEETNNPTCQGRAYGNL
GLTYESLGNYERAVMYQEQHLSIAAQMNDLVAKTIAYSSLGRTHHALQNYSQAVMYLQEG
LRLAEQLGRREDEAKIRHRLGLSLWVSRNLEEAQHQLYRASALFENIRHEAQHSTDYKLS
LFDLQTSSYQALQRVLVSLGRHDEALAVAERGRTRAFADLLVERQTGQQESDPLTPVTID
QILEAINNQRSLVLYYSQAAGYLYSWLLAPGAGILKFHECYLGDGLAENSNDFNETSSIN
LQASSFSTLEQYVTNVREALGVDSYYTSRMCSNSETESEAGDLLDQHFEEMNNKLTSITD
PTGFLRMVSRNNLFNRSCQSMSSLFSSNTSGLQDSTSSLPRKQNSVDKQPLRALYDLLIS
PMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSIIAVPSIRALQ
GSPRSHLRKSTSVCSSSTSMAAVIGNPTLPSAVMDRWLWGPMPSAEEEAYMVSELLGCQP
LVSTAATKERVMSMLSQAECIHFATHISWKLAALVLTPNNEGSTIGGKSSIGNSYTIPES
LRMQDDASDVESITDSPPLQEFLLTAADILELHLPVKLVVLGSYQESNNKVTADGIIGLT
RAFLAAGAHCVLVSLWPVPVAASKMFVHTFYSSLLNGMKSSAALGEAMKIVQSSKQFAHP
SNWAGFTLIGNDVKLNSPSSLIGQALSEILQHPDRARDALRVLLHLVEKSLQRIQNGQRN
SMYTSQHSVENKVGGVPGWQSLLTAVGFRLDPPTSGLPAAVFFPVSDPGDRLQQCSTTLQ
SLLGLPHAALQALCKLITASETGEQLINRAVKNMVGMLHQVLVQLQTGEKEQDFSSAPIQ
VSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRKTMHFALQSLLALFDSTE
LPKRLSLDSSSSLESLSSSQSVSNPTGQLNPPFSPTYGESMASDAISVYSLSSIASSMSF
ASKTDVTGEGMLQRGRQDYERPKNIYPHKAAMLRSRSSPQASNTSRDDEEYEGFSIISSE
PLSVYTDTVSVSASPNKERTTEQVEHCHNFEESHTFKGNTSASSSPVKITLIPSPNSPFQ
KVESRNKLPSSDTGESDQSSTETDSTVKSQEDKVTKLNPQELAQKILEETQSHLLAVEKL
YQSGGPASKTSSAEVDHGATGHHGSSAFKSSDTSAFSRPQNGTGQKKQSSPITAKPKPPT
RSSSLQKVNSGSNTPTSDIIEVGQSAGDCYPKGSESRQTTATSSPIGDLRRSPGSLRQSP
GSLRQSPGSLRQSPGSLRQSPGSSSDQSPIKLKYPSSPYSAHISRSPSSGHQSPAGSNPS
PALSYSSAGSARSSPADIPDLSKLKMTAIDEKVKAVHNLKTFWTSATQPSSRPVRALRSN
PALIGSKADALSYLNLSPARRGKKEGKEDKLELKEFSKLPYTDKKAQNGRGGYQETSKPA
ETMQPPSITQREARPLRFPSGNGYKFLSPRKFFPTSKC
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagacagcaagagagagaagagttccgtctttgaagaaagtttaatgcgcaga
atttctggcagcagcagtgtgcacacactgagcaaagcagctttcattgagaaagtccga
gaaagtaacgcagcatgtcagagtggagatttcaccaccggtgtccagctctacacagaa
gctatagcagctgatcctcagaactgtatcctatacagcaaccgatcagctgttctggtg
aaactgaatgagtatgagaaggccctggatgatgcagtgaaagcacgactcctgaaccct
aagtggtcgaaggcatacttccgacagggtgttgctctccagtatctcggccgccatgca
gatgcgctggctgcatttgcatctgggctggcccaagatccaaaaagcttgcagctgctg
gtcgggatggtggaagctgctatgaagtctccactacgagaatccctggaaccaacctat
cagaagctacagaaaatgaagttggacaaaagcccttttgttgtcgtatctgtcattggc
caggagcttttgacagcaggacatcacagtgcatctgtagttgttctggaagctgccttg
aaaattggaacgtgcagcttgaaacttcgtgggtcagtgttctcggctctaagcagtgct
tactgggcattagggaatacagagaagagtattggctatatgcagcaggacttcgatgta
gccaagactttaggtgaccatacgggcgagtgtcgagcccatggcaatctgggatcggca
ttcttctccagcggcaactaccgagaggccctaaacaaccaccgtctccagctagtgctg
gccatgaagctaaaagatcgtgaggcagcctcttcagcattgagcagtttgggtcatgtc
tacacagccatcggagactacccaaatgcactggccagtcacaaacagtgtgtccttcta
gctaaacaatccaaagacgaactctcggaagccagagaactgggcaatatgggagctgtt
tacattgcaatgggtgactttgaaaatgcagtgcagtgccatgaacagcacctcagaatt
gcgaaggaactgggcaacaagcgagaggaagcaagggcttacagtaacctcggcagtgcc
tatcactacaggaggaactttgacaaagcaatgtcctatcataaccacgtgctggaatta
gcacaggacctagacgagaaggcaattgaaatgagagcgtatgcagggctgggtcatgca
gcgcgatgcatgcaggatttggagagagcaaagcagtaccatgagcaacagttgaatatt
gcagagaacctgaaggatcgtgcagcagaaggacgggcctcctctaatcttggtataata
caccagatgaaaggagattatgaaagtgcactgaaactccacaagactcacctctccatt
gctcaggagctcaatgattatgctgcacaaggaagagcctatgggaatatgggtaatgcc
tataatgccctgggaatgtatgaccaagcagtgaagtaccaccgccaggagttgcagatc
tccatggaagttaatgaccgggcatcgcaagcatcaacccacggtaatctcgctgttgcc
taccaggctctgggtgcccatgatagggctttgcagcactatcaaaaccatttaaacata
gcacgagagttacgggatatacaaagtgaagctcgggcacttagcaacctaggtaacttc
cactgttcaagaggagagttcatccaggctgttccatattatgagcaatatctgcgcttg
tctcctgacctacaagatatggagggagaaggaaaagtatgtcacaaccttggctatgct
cattactgtctgggaaactaccaagaggctgtgaaatattacgaacaagatttagctcta
gccaaggacttgcatgataaacttagtcaggcaaaggcctactgtaatttgggcctcgca
tttaaagcccttggtaattacgctaaagcagaagaaagtcagaagtatgtcctatcatta
gcccagtccctaaacaactctcaagccaaatttagagctttaggcaaccttggtgatatc
tttgtgtgcaagaaagatgtgaacggtgctgttaagttctatgaacagcagttgactttg
gctcatcaagttaaagaccggaagcttgaagccagtgcttatgccgcactgggtactgca
tacagactaatacagaaatacgacaaagcattaggatatcatacacaagagcttgaggtc
tatcaagaactgagtgacttgctgggcgagtgtaaagcacatggccaccttgcagcagtc
tacatggcacttggtaaatataccatggccttcaaatgttacgaagaacagttggagttg
ggacagaagctaaaaaatcccaatattgaggcacaagtttatggcaacatgggaatcacc
aaaatgaacatgaatgtaatggaagatgctattggctactttgagcagcagctcgctaca
ctgcagcagttgagcggcaatgatgcagttctggatagaggacatgcctatggaaatctg
ggagattgctatgaagcattaggagattacgaggaagctgtcaaatatcatgagcagtac
ttatcagtggctcagagtttaaatcggatgcaagaacaagccagagcctatcggggactt
gggaatgggcatcgggcgatggggaaccttcagcaagctcttgtgtgttttgaaaagaga
ttggtagtagcccatgaacttggagaatcatccaacaaagcccaagcttatggggagctt
ggcagcttacacagccagctaggaaactatgaacaggccatttcttgccttgaacgccaa
ctaaacattgcccgtgagatgaagaatcgaattctggagagtgatgctgcctgtggtctt
ggcggagtttaccaacagatggcggaatatgaaacttcactgcagtaccatcagcttgat
ttagagattgcagaggaaaccaataaccctacatgtcaaggtcgtgcctatggtaacctc
ggattgacctatgaatctttgggaaattatgaacgagctgtaatgtatcaggagcagcat
ctgagtattgctgcccagatgaatgacttagtggccaaaactattgcatacagcagcctg
gggagaacacaccatgccttacagaactactcacaggctgtcatgtatttacaggaagga
ctgaggctggcagagcagcttggccgcagagaggatgaggctaaaattagacatcgactg
ggcctttcgctgtgggtcagcagaaaccttgaagaggcacaacaccagctttatagagca
tctgccttatttgaaaatatacgtcatgaagcacagcatagcacggattataagctttca
ttgtttgaccttcaaacgtcatcctaccaagctttacaacgtgtattggttagtctgggt
cgtcatgatgaggcattagcagtagcagagaggggaagaacaagggcatttgcagatctc
ttagtagaaaggcaaactggacagcaagaatctgacccattgactcctgtcacaattgac
cagattctggaggccatcaataatcaacgtagtctggtgttatactattcacaagcagct
ggatacctctacagttggttactggcaccaggagcaggaatattaaagtttcatgagtgc
tatttgggtgatggcctagcggaaaacagcaacgattttaatgaaacaagcagcatcaac
ctgcaggcttccagtttctctaccctcgaacaatatgtgaccaatgttcgagaagcactt
ggcgttgactcctactataccagtaggatgtgttcgaatagtgagacagagagtgaggct
ggagatcttcttgaccaacattttgaagagatgaacaataaactgacttccatcactgat
ccaacaggattccttaggatggtcagcaggaacaatctcttcaacaggagctgtcaaagt
atgagcagtctgttcagcagcaacacttcaggccttcaagactccacctcatctttgcct
cgtaaacagaactcagtcgataagcaacctcttcgtgctctctatgacctcctcatttcc
ccaatggaagggggattgatgcattccagtggacctgttggccgacaccgtcagcttgtg
ttagtcctagaaggggaattatacctcattccatttgctctactgaaagggagctcttcg
aatgaatatctgtatgaacggttcagtatcatcgctgttccctcaatccgggctcttcaa
ggaagccccaggtcccatcttcgaaagagcacatctgtgtgcagctcctctacctcaatg
gcagctgtaataggtaatcccacacttccgtccgcagtaatggaccggtggctctgggga
cccatgccttctgctgaggaagaggcctacatggtttcagagctgctgggctgccagccc
ttggtaagcacggccgctaccaaggaaagggtgatgagcatgctcagtcaggcagaatgc
attcattttgcaacccacatttcctggaaactagctgctttggtcctcacaccaaataac
gaaggaagcaccattggtgggaagagttccattggaaacagctacacaattccagagtct
ctgagaatgcaagatgatgctagtgatgtggagagcataactgacagccctccgctgcag
gagttcttattgacagcagctgacatcctggaactgcaccttcctgtcaagttggtcgtt
cttggctcctaccaagagtcgaacaataaagtaacagcggatggcattattgggctgacg
cgggcctttctagctgcaggagcgcactgtgttttggtttctctttggccggttcctgtg
gctgcatccaagatgtttgtccacaccttctactcctctctgctcaatggaatgaaatcc
agtgcagcgcttggggaagccatgaagatagtgcagagcagcaagcagtttgcacatcct
tcaaactgggcaggtttcacgcttattggaaatgatgttaaattgaacagcccctcatct
cttattggtcaggcactgtctgaaatcctccaacatcctgaccgtgctcgggatgctctc
cgtgttctgctgcacttggtggagaagtcactgcagcgaatccagaatggccagcggaat
tccatgtacacctcccagcacagtgtcgagaacaaagtgggaggtgtcccaggttggcag
tcactccttactgcagtaggattcaggcttgaccctccgacgagtggactgccagctgct
gtcttctttccagtgtcagaccctggagatcggcttcagcagtgcagcaccacactccag
tcactcctagggttgccccatgctgcactgcaagctctctgcaaacttataacagcttca
gagacaggagaacagcttattaatcgggctgtaaaaaatatggttggaatgctccatcaa
gtacttgttcagcttcagaccggcgagaaggaacaggatttttcttcagctccgattcaa
gtgtctataagtgttcagctctggcgactgccagggtgtcatgagttcctggcagcatta
ggttttgacctgtgcgaggtgggacaagaggaagtggtgttgaagacgggcaaacaggca
aacagaaaaaccatgcactttgctctccagtctttgcttgctttgtttgattccacagaa
ctgcccaaacgactcagtctcgacagctcctcatccctggagtctctgtcctcctctcag
tcagtttccaatccaacgggacagctaaacccaccattttctcccacttacggagagtcc
atggcttctgacgccatttctgtctacagcctcagttccatcgcctcctcaatgagcttt
gcttcgaagactgacgtgactggtgaaggaatgctgcaaaggggccgacaggactatgaa
agacccaagaacatttacccacacaaggccgccatgctacgtagtaggtcttctccacag
gcaagtaacacaagccgagatgatgaggagtatgagggattctccattattagcagtgag
ccattaagtgtctacactgacactgtcagtgtatctgcctcacccaacaaagaaaggact
acagaacaggtagaacactgccataattttgaggaaagccacacattcaaaggcaatacc
agtgcttccagttctcctgtcaaaataacgctcattccgagtccaaactcaccatttcag
aaggtggaatccagaaataaacttccaagttcggacacgggagaatcagatcagtccagc
acagaaacagatagcacggttaaatcccaggaggataaggtgactaaacttaatcctcag
gagctggcacaaaagattttggaggagactcaaagccacttgcttgctgttgagaaattg
tatcaaagtggtggaccagcaagcaaaaccagttcagctgaagtggaccatggtgcaaca
gggcatcacggttcttcagcttttaaatcttcagatacaagtgcgttcagtagaccacag
aatggcaccgggcagaaaaagcagtcttcaccaataaccgcaaaaccaaagcctccaaca
cggagctcatcactgcagaaggtgaactcaggaagcaacactcctaccagtgacatcatt
gaagtaggtcagtcagcaggggactgctaccctaaagggagtgagagcagacagaccaca
gcaacatcttcacccattggggatttgcgccggtccccaggttctttgcgccagtcccca
ggttctttgcgccagtccccgggttctttgcgccagtccccgggttctttgcgccagtcc
ccgggttcttcgtctgatcaatcaccaatcaagctcaaataccccagctccccttacagt
gctcacatctccaggtctccaagctcaggtcaccagtctccagctgggagtaacccatct
cctgccctttcatactcatcggcaggctcagcacgctcgagccccgctgatatccctgac
ctgagcaaattgaaaatgactgccattgacgagaaggtcaaggctgtccacaacctcaaa
accttttggactagtgcgacacagccttcatccagacctgttcgagctctgcgttccaac
cctgctcttataggctccaaagctgatgctctaagttatttgaatctttcaccagccaga
cgcggcaagaaggaaggaaaggaggataaacttgaacttaaggagttttccaagctcccg
tacacagacaagaaagcccaaaatgggcgaggtggttaccaggagaccagcaaaccagca
gaaactatgcagccaccaagtatcactcagagagaagcacgtccactgagattcccatct
gggaatggttataaatttctgtctccgagaaaattctttcccacctcaaagtgctga
DBGET
integrated database retrieval system
