Chiloscyllium plagiosum (whitespotted bambooshark): 122562634
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Entry
122562634 CDS
T08871
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122562634 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122562634 (dtx1)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122562634 (dtx1)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122562634 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
WWE_5
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
zf-UDP
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
122562634
NCBI-ProteinID:
XP_043571584
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All DBs
Position
25:22042536..22283505
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AA seq
624 aa
AA seq
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MARPSAASTPAMLPASGFGFGFPPQNFARVVVWEWLNEHGRWRPYSAGVCHHIENIVKCN
ARGSVVLGQAEAQLSPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDS
CSWTPYDMDICITIQNAYEKQHPWLDLTSLGFCYIIDFNSMCQMNRQTQRKRRLRRRMDL
AYPLTMGSIPKSQSWPVGAQSGQPCSCQQCVLVNSTRAASNAILASQRRKVYSATNGTLT
VRQSSSYSGAALWSTASTAGSTPPKSEQTRSPTTTQLSPISQSQSTTTATPIPGQNNLNR
PGTQRSAVVSTRASIPPGVPALPVKNLNGSGPVHPALAGMTGILMCAAGLPVCLTRAPKP
ILHPPPVNKSEIKPVPGISGICRKTKKKHLKKGKSPEDVVRRYMQKVKNPPDEDCTICME
RLVSSSGYEGVMSLKGVKPELVGKLSKCSHMYHLLCLVAMYNNGNKDGSLQCPTCKAIYG
EKTGTQPPGKMEYHVIPHSLPGYPEFKTIRIVYDIPAGLQGVEHPNQGKKFTARGFPRHC
YLPDNEKGRKILKLLIVAWDRRLIFTIGTSNTTGETDTVVWNEIHHKTEFGSNLTGHGYP
DPNYLENVLAELSAQGVVEDCIKD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaccctccgccgcctcgaccccagcgatgctgccggcgagcggcttcggcttc
ggcttcccaccgcagaatttcgcccgggtggtggtctgggaatggctgaacgagcacggc
cgctggagaccgtacagcgcgggcgtgtgtcaccacatcgagaacatcgtcaagtgcaat
gccagagggagcgtggtgctgggccaggcggaggcacagctctccccttatatcattgac
ctgcagtccatgcaccagttccggcaagacacaggaaccatgcgtccagtacgaagaaac
ttttacgatccctcctctgctccaggaaaagggatagtgtgggaatgggaaaatgacagc
tgctcctggactccgtatgacatggacatttgtataaccattcagaatgcgtatgagaaa
cagcatccttggttagacctgacttctctaggattctgttacattattgacttcaacagt
atgtgtcagatgaacagacagacccagaggaagcgccgactgcgccggcgtatggacctg
gcctatcctctgacgatgggttcgatccctaaatcccaatcctggcccgttggtgcccag
tcgggtcagccttgcagctgccagcagtgcgtcctggtgaacagcaccagggcagcctcc
aatgccatcctggcatcccagcggcggaaagtttattctgccaccaacgggactcttact
gtgcgccagagcagctcctacagtggcgccgccttgtggtcgacggccagcacagccggg
agcacacctccaaagtcggagcagacccgttctcccacgacaactcaactgtccccgatc
tcccaaagccaaagcaccaccacagcgacaccaataccaggccagaacaacctgaataga
ccgggtacccagaggtcagcagtggtcagcacgagggcttcgattcctccaggtgttcct
gctctcccagtgaaaaatctgaatggatctggtcctgtccacccagcacttgcaggtatg
actgggattctaatgtgtgcagctggtcttccagtgtgtctgactcgggctcccaagccg
atactccatccaccacctgttaacaagagtgaaataaagccagtgccgggaatatctggt
atctgcagaaaaactaagaagaagcatctgaaaaaaggaaaatccccagaggacgtggtg
cgaaggtatatgcagaaggtcaagaatccgccagatgaggattgcaccatctgtatggaa
aggttggtcagctcatcgggctacgaaggtgtcatgagtctgaaaggagtgaaaccggaa
ttggttggaaagctcagtaaatgcagtcacatgtaccatctcctgtgtcttgtggccatg
tacaacaatggcaataaggatggcagcctgcagtgcccaacttgcaaggccatttatggg
gagaaaactggaacacagccacccgggaagatggagtatcatgtgatcccacactcactg
cctggatacccagaattcaaaactattcgcattgtctatgacatcccagcaggactacaa
ggtgttgaacatcccaatcaaggaaagaagttcacagccagaggctttccacgacactgc
tatctgcctgataatgagaaaggccggaagattctaaagctcttgattgtggcatgggat
cgcaggttgattttcaccattggaacatccaacaccactggagaaacggatactgtagta
tggaatgaaatccatcataaaacagagtttggatcaaatttaactggacatggctaccca
gatcctaactatttggaaaatgtccttgcagagctgtctgcccaaggagtcgtggaagac
tgcataaaggactga
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