KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122562651
Entry
122562651         CDS       T08871                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122562651 (atxn2)
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122562651 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 122562651
NCBI-ProteinID: XP_043571605
LinkDB
Position
25:23561421..23666387
AA seq 1111 aa
MSMKQSNSRKPGGGIGTGGAATGAGGGGRQSGGRGRSSGKGPPQSTIPYDGIYANMRMVH
ILTSVVGAKCELKVKNGGIYEGVFKTYSPKCDLVLDAAHRKNIESSSRELGPKREDIVES
IIFKSADVVMLHFKDVDLSYARRVPSETDAFTDAAIGSRLNGEHKDKDLEPWDGGDSTNE
DLEALESDVSNGWDPNDMFRFNEETYGVRSTYDSSLSSYTVPLERDNSEEFLRREARAAQ
LAEEIESSAQYKARVALENDERTEEEKYTAVQRSPNEKESHAVTPRENKYIPPGQRNRDG
MSWGSTRQHSPRIGQSSSGPPPSRAGSHTTDYSPNSGTDQRVVNGGVAWPSPCPSPSSRP
PSRYQSAPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRM
SPKAQRHPRHRGPSGRTGVSSGSDFIGHNVSGEISAPVPRNSPSAGTWSSVVSGGSSSRL
SPKTHRPRSPRHGNQPSQYSPGNASSGMILSSQAGSVPAESLAMPAAAVSPTSATPAVNR
AVTPSSEAKETRLQEQKQNSPSVNKENPKPVEICNTPPSLTKPGIKATSPSASDHKKQIA
DLKKFREDFRLQTAPITDPVVDQFKSRESTENQSRDPIKEKITVIEPGSKESVSESSSNA
NTSNSSSKPSSPSASPNIISSEQKRGPDVTSQAVQTTGPTSKPEKEEKEDKKEGTPEQVR
KSTLNPNAKEFNPKTFYTPPKPTTTPTPPRPQAQPSPSIVVQQHPPVYNQPMCYAQNVVY
PVPVSPGVQTTHMYHVPMTPMPINQAKSYRAGKVPAMPQQRPDQHHPQGTPTIMHPVSAA
GQIVSTAPAYSQYVTYNPQQFPNQPLVQSVAHYQSQPQMYSQVMQSSARMMAPPGHGQPG
MVPSSTAQYPTAEQTHAMYVSPGPIHQQFAPHPTATLHPHAPHPQPSATPTGQQQGQHGG
SHPAQSPVQHPQHQAPQTLHLGNPQQQQAIYHTTLTPTPPSMTQGPSPQSPQTSFPSAQQ
TIYTLHPQQVQHGYSNPPHMAHVPQAHVQSGMGPPHHPAATHPPMMLMPAQPPGGQGGIP
QSALPPIPVSSTTHFSYMAHPQVQAHHQQPL
NT seq 3336 nt   +upstreamnt  +downstreamnt
atgtccatgaagcagtccaacagccgaaagcccggcggcggcatcggcactggtggagca
gcaactggagctggcggtggagggagacagtccggcggcagaggacgcagcagtgggaag
ggacctccacagtctactattccgtatgatggaatatatgcaaacatgcgaatggtccac
attcttacatcagttgtaggtgcaaaatgtgaactaaaggtgaaaaatggtggaatatat
gaaggtgtttttaagacctacagtcccaagtgtgacttggtgcttgatgctgctcaccga
aagaatattgaatccagttcacgagaactgggaccaaagcgtgaagatattgttgaaagt
atcatttttaaatctgcagatgtcgtaatgctgcattttaaagatgtagacttaagttat
gcaagaagagttccatctgaaacagatgctttcaccgatgctgccataggctcaagacta
aatggtgaacataaagacaaagatctagaaccatgggatggtggtgatagcaccaatgaa
gatttggaagctctggaatcggatgtgtctaacggctgggatcccaatgatatgttcaga
tttaatgaggaaacttatggcgtgagatccacctatgacagcagtttatcctcctataca
gtacctttggaaagggataattctgaagaatttttacgacgtgaagctagagcagctcaa
cttgctgaagaaatagaatcaagtgcccaatataaggcaagagttgcattagaaaatgat
gaaaggacagaagaggagaaatacacggctgtacaaagatctcccaatgaaaaagagagc
catgctgtcacccccagggagaataagtacattccaccaggacaaaggaatagggatgga
atgtcttggggaagtacaagacagcattcaccaaggattgggcagtccagctcgggccca
ccaccttcccgggctggatctcatacaacggattacagtcctaattctgggacagaccaa
agagttgttaatggaggtgttgcctggccttcgccttgcccatctccttcctcacgccca
ccttctcgctatcagtcagctcccaactctcttccacctcgggcagccactcctaccagg
ccgccctccaggcccccttcacggccttcaaggcctccgtctcacccctctgctcatggt
tctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggtcctccacgaatg
tctccgaaggcacagcgccatcctcgacatagaggtccttctggtcgaactggcgtgtct
tcaggttcagatttcataggtcacaatgtgtctggagaaatttctgctcctgttccacga
aacagtccttcagcagggacatggtcatctgtagtcagtggaggatcaagttcccgttta
tctcccaaaacacacagaccgcgatctcctagacatggtaaccaaccgtcccagtacagt
cctggaaatgcttcaagtggaatgatcttatcttctcaagctggcagcgttccagctgaa
tctttagccatgcctgctgctgctgtatctcctacatcagccacccctgctgtgaataga
gctgttaccccatcatctgaagctaaggaaaccagacttcaggaacagaagcagaattcc
ccctctgtaaacaaagagaatccaaagcctgttgaaatctgtaatactccccctagctta
accaaaccaggaatcaaagctacatctccatcggcttcagatcataagaaacagatagca
gacttaaagaaattcagggaagactttagattgcagactgctccaatcactgatccagtt
gtggatcagtttaagtccagagagagtacagagaaccaatccagggatccaatcaaggag
aagataacagtgattgaaccgggtagcaaagaatctgtcagtgagagcagctcaaatgca
aacaccagcaatagtagcagcaaaccaagcagtcccagtgcttccccgaacataatcagc
tctgagcagaagagaggaccagatgtgacttcccaggccgtccagactactggtccaacc
agtaagccagaaaaagaagaaaaagaggataaaaaggaaggtacaccagaacaagttaga
aaatctacattgaatccaaatgctaaagaattcaatccgaagactttctatactcctcct
aagccaacaaccacaccaacgccgccacgtcctcaagcccaacctagtccatctattgtg
gtccagcaacatcctccagtgtacaatcagccaatgtgttatgcgcagaatgtggtatac
ccagttccagttagcccaggagttcagactactcacatgtatcatgttccaatgactccg
atgccaatcaaccaagctaagtcatatagagcaggtaaagtaccagccatgccacaacag
cgaccagatcagcatcaccctcagggcacaccaactataatgcatccagttagtgcagct
ggccagattgtttcaactgctccagcttattcacaatatgttacttataaccctcaacag
tttcctaaccaaccccttgtacagtctgtagcacattatcaatcacagcctcagatgtac
agccaagtaatgcagagtagtgctcgaatgatggcaccacctggccatgggcaaccggga
atggtcccttcgtctacagcacaatatcctactgctgaacagacacatgctatgtatgtg
tctccaggcccgattcatcagcagtttgcaccccacccgactgctaccctacatccacat
gctccacacccacaaccatctgcgactccaactggacagcaacaaggacagcatggcggc
agtcatccagcacagagcccagtccagcatcctcaacatcaggctcctcagactcttcat
ttgggcaaccctcaacagcagcaagcaatttaccacacaactcttacaccaactcctcca
tctatgacacaaggtcctagtccacagtctcctcagactagcttcccatcagcacagcag
acaatctatacacttcaccctcagcaggtgcagcatggatattcaaatcctccacatatg
gcacatgtaccacaggcacatgtacagtctggaatgggccctccccaccaccctgctgct
acccatcctcccatgatgctaatgcctgcacaaccaccaggtggtcaaggtggtattcct
cagagtgcactgccacccattccagtttcctcgactacacatttctcttatatggcacac
ccccaagtacaagcccatcatcagcagccgttgtag

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