KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122562714
Entry
122562714         CDS       T08871                                 
Symbol
zmat5
Name
(RefSeq) zinc finger matrin-type protein 5 isoform X1
  KO
K13152  U11/U12 small nuclear ribonucleoprotein 20 kDa protein
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpla03041]
    122562714 (zmat5)
Spliceosome [BR:cpla03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    122562714 (zmat5)
SSDB
Motif
Pfam: zf-CCCH zf-U1 zf-CCCH_4 zf_CCCH_4 DUF6446 zf-CCCH_2 zf-CCCH_9 DUF6735 Pfk_N Torus
Other DBs
NCBI-GeneID: 122562714
NCBI-ProteinID: XP_043571761
LinkDB
Position
25:30165022..30204426
AA seq 171 aa
MGKTYFCDYCGRSFQDNLHNRKKHLQGVQHQRAKKFWFDCFRDSATILAEELAKKPCRKF
LQSGQCDFGVNCKFSHMTDDDVQKLRQSVEEENKVGHDNRSTPDINEWLLKRAKRKESNS
NISGSEMAKEVDDEPVVYWLPPGYQAVHELPPSLHPPPPGGWKTAVNVEWG
NT seq 516 nt   +upstreamnt  +downstreamnt
atggggaaaacctatttctgcgattattgtggcagatcgtttcaagataacctccataac
cgaaagaaacacttgcaaggagttcagcatcagagagcgaagaagttttggttcgactgt
ttccgagatagtgccacaatactggcagaagaacttgccaaaaagccttgcagaaagttt
ctacaatcaggtcagtgtgattttggtgtaaattgcaaattctcccatatgactgatgac
gatgttcagaagctgaggcaaagcgtggaagaagaaaacaaagtaggacacgataacaga
tccacccctgacattaatgagtggttgttgaaaagagcaaaaaggaaagaaagcaattca
aacatcagtggttcagaaatggcaaaagaggttgatgatgaacctgttgtttactggcta
cctccaggatatcaagcagttcatgagctaccaccatctctccatcctccacctcctgga
ggttggaaaactgcagtaaatgttgaatggggttaa

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