Chiloscyllium plagiosum (whitespotted bambooshark): 122562722
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Entry
122562722 CDS
T08871
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122562722 (ddx54)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122562722 (ddx54)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Helicases
122562722 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DNA_pol3_chi
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
122562722
NCBI-ProteinID:
XP_043571780
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All DBs
Position
25:31739910..31778060
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AA seq
666 aa
AA seq
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MALKKKRPNRGRKPRAHSQPHHRDVDVESDGGEFQLAPLTEEDDSVGKHNNRCLQSFPSG
DCPSDVEPDTREMVRQQNRKKKSGGFQSMGLSFPVFKGIMKKGYKVPTPIQRKTIPVILD
GKDVVAMARTGSGKTAAFLIPLFERLKVHNAQSGARALILTPTRELALQTMKFTKELGKF
SGFKTALILGGDKMEDQFEALHENPDIIIGTPGRLMHIVVEMNLKLQNVEYVVFDEADRL
FEMGFAEHLQEIIRRLPDSRQTLLFSATLPKQLVEFARAGLTEPVLIRLDVDTKLNDQLQ
MAFFHVRSDDKAAVLLHLMRNIIKPQEQTVIFVATKHHVEYLKELLTRQGIHCSYSYSAL
DQTARKINIGKFVHRKCMVMIVTDIAARGIDIPMLDNVINYNFPSKAKLFLHRVGRVARA
GRSGTAYSLVALDEIPYVYDLHLFLGRPLKFASQAENSEETSGIYGKVPQNTIDDEESLL
IADHKASLDLQNLKRVSENAYRQYLKSRPNPSPESIKRVREMDFSTLGIHPLFGVNIKDA
ELQRLKIIDSIKNYKAKSTIFEVNSTNKTSASEIMRMTRNKQILVINKFQQLKEEKKTAP
SKNMPTLMEADLPDEDNIETVFSEVMGRKRKSKQPTEHFPKNKKECEQDEEFYIPHQPKD
FNSERG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagaagaagcggccgaacagaggccggaaaccccgggcccacagtcagccc
caccatcgcgatgtagatgtagagagtgacggcggggagttccagttggctcctttaacc
gaggaggatgacagcgtgggcaagcacaacaatagatgtttacaaagctttccttcaggt
gattgtccatcagatgtagaaccagacacgagagaaatggtccggcaacagaatagaaag
aagaagtcgggaggctttcagtcaatgggtttgagctttcctgtttttaaaggtattatg
aagaaaggatacaaagtaccaacgccaattcagagaaagactatccccgtgatattggat
ggcaaggatgttgttgcaatggcacggacaggtagcggtaagactgcagcatttcttatt
ccgttgtttgaacgactgaaggtgcacaatgctcagtcaggagcaagagctttaatcctt
actccaaccagagaactggcattacaaaccatgaagttcactaaagagctgggaaagttt
tctggcttcaaaacagctttaatcttgggtggagacaaaatggaggatcagtttgaagca
ctgcacgaaaaccctgacataataattggcacaccgggtcgtttaatgcatatagttgtg
gaaatgaacttaaagctgcagaacgttgaatatgtggtctttgatgaagcagacagatta
tttgagatgggatttgctgagcacttgcaagagattatccgaaggctgcctgactcaaga
cagactttgctgttttcagctacactaccgaagcaactggtggagtttgcacgtgctggt
ttgacagaaccagttctaatcagactggatgtggatactaagctgaatgatcagttgcag
atggcatttttccatgtccggtctgatgataaggctgctgttctacttcacttgatgaga
aatatcataaaacctcaagagcagactgtcatttttgttgctaccaaacatcatgtggaa
tacttaaaagagctcttaaccagacagggtattcactgttcatacagctacagtgctctt
gaccaaacagcaagaaaaatcaacattgggaaatttgtccacagaaagtgtatggtgatg
atcgtcactgacattgcagctcgtggtattgatattcccatgctagataatgtaataaac
tacaactttccatccaaagcaaaacttttcttgcatagagttggtcgagtagccagagct
gggagaagtggtacagcttactcgttggtagccctggatgaaattccatatgtttacgat
ttacatttgtttctcggacgtcctctcaaatttgcaagccaagctgagaattctgaagaa
acaagtggaatatatggcaaggtaccccagaataccatagatgatgaggaatcactactt
atagcagaccataaggcttcgctggatcttcagaacctgaaaagagtgtctgaaaatgct
tacaggcagtatctgaagtcaagaccaaatccttctccagaatcaataaaaagggttaga
gaaatggacttctcaacactggggattcatcctttatttggtgtgaacataaaagatgca
gaacttcaaagactaaaaattattgacagtatcaaaaactataaagcaaaatctaccatt
tttgaagtcaattctacgaataaaacctctgcaagtgagatcatgaggatgacacgaaat
aaacagatcttggttataaacaagtttcaacaattgaaggaagaaaagaaaacagctcca
tctaagaacatgccaaccctgatggaagcagatctccctgatgaagataacattgagact
gtcttctctgaagttatggggaggaaaaggaaaagtaaacaaccaacagaacattttcct
aaaaacaagaaagaatgtgagcaggatgaggaattttatatcccccaccaacctaaagac
ttcaattccgaaagagggtaa
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