Chiloscyllium plagiosum (whitespotted bambooshark): 122562754
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Entry
122562754 CDS
T08871
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
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Gene cluster
GFIT
Motif
Pfam:
BTB
Motif
Other DBs
NCBI-GeneID:
122562754
NCBI-ProteinID:
XP_043571826
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All DBs
Position
25:complement(38166420..38172177)
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AA seq
1059 aa
AA seq
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MRRGEGIPVHRCVLAAFSPFFLQRFSESDAHPKKVSMELPGLRADTLRALLRFMYTAQIQ
LPRDETAEAFLRAARGLGILGLSGGSGTSPGSPALQGDSSPPAPLGGNARGSETEAKPEA
PVVSAQAPGGNARVSETDTKPEAPVVSVQVPGGNAHVSKTDTKPKAPVLSAQVPSGNARV
SETDTKPEAPVVSVQVPGGNDRVSENNSKPKAPLVSVQVPGGNAHVSKTDTKPKAPVVSA
QAPVGNARVSENNSKPKAPVVSAQAPVGNARVSENNSKPKATSVTTTSSSPQPRLRGKRA
YTPAELPASTLVTSWRRMRVVRPVTAQSAEEGSVAGESPFPRRQWRRRKGQPAGDPAPPA
VPVTDQLPTPPPHVAHPGRYNPSEPDSPEPTEVTAARPGREGCEPETRASTGLGGALQSF
RETVPSCAPTGVSDQAGRSLSPGEGHPAPPGKEAQQTRPAVSGPPPSRVESSGWGCRPVS
EQGPPRLAGDISADREGVGIAARLGKRPSGQGASPERPEGITKVKLQKLSHSREWVVIPV
PEWQETGLQPHTGNRGRGKGVGASRRAGRRKASINLTHPLTGLEKNDHRPEGLGGDRRLE
GLEGDHRPEELGGEQGTEGLGLGDDQGTGGLGLGVGEGTGGLGLGVGEGTGGLGLGIGEG
TGGLDLGVSQGFGGLDLGVDQGTGGLGLGDDQGTRGLGLGVDQVTGGLGLGDDQGTGALG
LGVGESTGGLGLGVGEGTGGLGLGVGQGAGGLGLGVGQGTGGLGLGVGEGTGGLGLGVGQ
GAEGLGLGVGQGTGGLGLGVGQGAGGLGLGVGQGTGGLGLGVGKGTGGLGLGVGKGTGGL
GLGVGQGAGGLGLGVGQGTGGLGLGVGLDTGGLDLGVGQRPREVRIYQKWEFDQRMVVHQ
TLGGLVPDGMLGPGERAPVCNAPYGPEQRGSTRATMFPWETGVQGVPDRPDQCGLALPQI
TDLDGASLSTGEWGFARLCARAQGGISASAGHWESAWRQFAGQHRMVEDSMVSSPSSEDE
ELDVGDSRDAESLPLVTVRPEASPPPSPPRDYTEIDVVG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaggcgagggaatcccggtgcaccgctgcgtgctggctgctttcagccccttc
ttcctccagcgattctccgagagtgatgcccaccccaagaaggtgtccatggagctgccg
gggctgagggcggacacactgagggccttgctgcggttcatgtacacggcacagatccag
ctgccccgagacgagacggctgaggcattcctgcgggcagcacgcgggctcggtatcctc
gggctctccggggggagcgggacatcccccggctcccccgccctccagggagacagctcg
ccccctgcccccctgggcgggaatgcccgcggctccgagactgaggccaaacccgaggcc
ccggtggtgtccgcgcaggcgcccggtgggaacgcccgtgtgtccgagactgataccaaa
cccgaggccccggtggtgtccgtgcaggtgcccggtgggaacgcccatgtatccaagact
gataccaaacccaaggccccggtgctgtccgcgcaggtgcccagcgggaacgcccgtgtg
tccgagactgataccaaacccgaggccccggtggtgtccgtgcaggtgcccggtgggaat
gaccgtgtgtccgagaataattccaaacccaaggccccgctggtgtccgtgcaggtgccc
ggtgggaacgcccatgtatccaagactgataccaaacccaaggccccggtggtgtccgca
caggcgcccgttgggaacgcccgtgtgtctgagaacaattccaaacccaaggccccggtg
gtgtccgcacaggcgcccgttgggaacgcccgtgtgtccgagaacaattccaaacccaag
gccacctccgtcaccaccacttcctcttcccctcaaccgaggctgaggggcaagagggcg
tacaccccagcagagttgcccgcctcgacgctggtcaccagctggaggaggatgagggtg
gtccgccctgtgaccgcccagtcggctgaggaaggctccgtcgccggggagtctcccttc
ccccggcgacagtggaggcggaggaaggggcagcccgctggtgaccccgcccctccagcg
gtgccggtcaccgaccaactccccacccccccgccccacgtcgcccaccccggcaggtac
aacccctctgaaccggacagcccggagccgacggaagtcacggcagcgcggccaggccga
gaggggtgcgagccagagacgagagcgagcacaggcctcgggggggccctccagtcattc
agggagactgttcccagctgtgcaccgactggggtctctgaccaggccggccggagcctc
agcccaggggaggggcacccagcgccgcccgggaaagaagcccagcagacacgcccagca
gttagcggcccaccccccagcagagtggagagctcagggtggggctgcaggcccgtctca
gagcaggggcctccccgtctcgctggggacatcagcgcggaccgggagggggtgggcatt
gccgcccgactggggaagaggccgagcggtcagggcgccagcccggagaggccggagggc
atcaccaaggtcaagctgcagaaactgagccactccagggagtgggtggtcattcccgtg
ccggagtggcaggagacaggcctgcagcctcacacagggaatcgggggcgagggaagggg
gtgggggcgagccggagggcagggagaaggaaagcatcaatcaatcttacacatcccctg
actggcttggagaaaaatgaccataggcctgagggcctggggggtgaccgtaggctggag
ggcctggagggtgaccataggccggaggaactggggggtgaacaaggcactgaaggccta
ggcctgggagatgaccagggcactggaggcctaggcctgggagtaggcgagggcactgga
ggcttaggcctgggagtaggcgagggcactggaggtctaggcctgggaataggcgagggc
actggaggcctcgacctgggagttagccagggctttggaggcctcgacctgggagttgac
cagggcactggaggcctaggcctgggagatgaccagggcactagaggcctaggcctggga
gttgaccaggtcactggaggcctaggcctgggagatgaccagggcactggagccctaggc
ctgggagtaggcgagagcactggaggcctaggcctgggagtaggcgagggcactggaggc
ctaggcctgggagttggccagggtgcaggaggcctaggcctgggagttggccagggcact
ggaggcctaggcctgggagtaggcgagggcactggaggcctaggcctgggagttggccag
ggcgcagaaggcctaggcctgggagttggccagggcactggaggcctaggcctgggagtt
ggccagggcgcaggaggcctaggcctgggagttggccagggcactggaggactaggcctg
ggagtaggcaagggcactggaggactaggcctgggagtaggcaagggcactggaggccta
ggcctgggagttggccagggcgcaggaggcctaggcctgggagttggccagggcactgga
ggcctaggcctgggagttggcctggacactggaggcctagacctgggagttggccagagg
cctagagaagtacgcatttaccaaaagtgggaatttgaccagagaatggtagttcaccag
acgttgggaggattggtaccggatggtatgctaggcccgggcgaacgtgccccagtttgt
aacgccccctatgggccagaacagagggggtccaccagggccaccatgttcccttgggag
accggtgtccagggagtccccgaccgaccagatcagtgtggcctagcactgccgcagatc
actgatctagatggtgccagcctctccaccggtgaatggggtttcgcccggctatgtgcc
agggctcagggtggtatcagtgcctcagctggccattgggaaagtgcctggaggcagttt
gcaggtcagcatcggatggttgaagattccatggtatcttccccttcgtcagaggatgag
gagttggacgttggtgatagcagagacgctgagtcattgcccctagttacagtaaggcct
gaagcctcccctccaccctcccctcctcgggactatacagagattgatgttgtcgggtga
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