Chiloscyllium plagiosum (whitespotted bambooshark): 122562785
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Entry
122562785 CDS
T08871
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122562785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122562785
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122562785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
122562785
NCBI-ProteinID:
XP_043571900
LinkDB
All DBs
Position
25:41340212..41484030
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AA seq
368 aa
AA seq
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MEADANQANSVLSADSQHDPCKMFVGGLSWQTTQEGLKEYFCKFGDVKECMVMRDPVTKR
SRGFGFVTFVDQTGVDKVLAQPRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVN
TTVEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGTARGRSRVMPYGMDAFMLGIGMLGYPGFQAASYASRGYTGLAPGY
TYQFPGPLLLPPATTLPSSAGRAGQSGVQTSQWPPSMLLQDWPTGAIPLTAYGPMAAAAA
AAVVRGTGSTPTRTGGFLGTTSPGPMADLYGAANQDSGVSSYISAASPAPSTGFGHSLGG
PLIATAFT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgctaaccaagccaattcggtgctcagtgcagactctcagcacgatccc
tgcaaaatgttcgtcgggggactgagctggcagaccacacaagaaggtctcaaggaatat
ttctgtaaattcggagacgtgaaggagtgcatggtgatgcgggatcctgttacaaagcgg
tcaagaggatttggatttgtcacttttgttgaccaaacgggcgtagataaagttctagcg
caacccaggcatgaactagattctaaaacgattgatcctaaagtggcttttccacgtaga
gcgcagccaaagatggtgaccagaacaaagaagatctttgtgggcggattatctgtaaat
accacagtggaggatgtcaagcagtattttgaccagtttggaaaggtagatgatgcaatg
ctgatgtttgacaagacgaccaatcgacatcgaggctttgggtttgtaacatttgagagt
gaagatatcgtggagaaagtgtgtgagattcacttccatgaaatcaacaacaaaatggtg
gaatgtaagaaggcccagcccaaggaggtgatgtcaccaaccgggaccgccaggggtcgt
tctcgagtgatgccctatgggatggatgcctttatgttggggattggcatgctcgggtac
ccaggcttccaggctgcttcgtatgcaagtcgtggttacacagggctcgctcccggttac
acctaccagtttcccggtcccttattgttgcctccagccactacccttccatcttcagca
ggccgggcagggcagtctggggtacaaacctcacagtggcccccatcgatgctgctccag
gattggccgacgggagcaatccccctgactgcatatggaccaatggcagcagctgcagca
gcagcagtggttcgagggacaggttcaaccccaacccgcactggagggttcctgggcacc
accagcccaggccccatggcagacctgtatggggcagctaaccaggactctggggtcagc
agttacatcagtgcagccagcccagccccgagcactggattcggccacagtctagggggg
cctttgattgcgacagctttcaca
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