Chiloscyllium plagiosum (whitespotted bambooshark): 122562852
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Entry
122562852 CDS
T08871
Symbol
ddx51
Name
(RefSeq) ATP-dependent RNA helicase DDX51
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122562852 (ddx51)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122562852 (ddx51)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Helicases
122562852 (ddx51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
GP68
MIT
Motif
Other DBs
NCBI-GeneID:
122562852
NCBI-ProteinID:
XP_043572066
LinkDB
All DBs
Position
25:48221754..48279705
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AA seq
709 aa
AA seq
DB search
MALFTINRYLCDDEPANSPHDESRSQTLLQKLRREAKARQQQLEVKRGPMDEEGPKNQRE
DENRGRKGKKRKREAEEEATISEKSRKKARHLSNESEDSSKNGRHVGSQVLKSEKGSAGV
SAKQLHNKKVKRNNTGVERKRKHQDQSTNNTETSNETNNDQARPNGDLEKPEQTEAKEKS
DQDENHTSTDSKSSLIILGGFQKKTIQKVHRVLPQWLAKPMLVNKDIKQNLNAIENVPGI
HEKLLQKLRTNGIHSFFPVQTEVIPILLESTKHGLWLGRGGYRPRDICVSAPTGSGKTLA
FVIPIVQALMGRVVCRVRALAVLPTKELAQQVCKVFKRYTEGLGLKVVIVAGQKQFAVEQ
ASLVEHTFTGYCSLADIIVATPGRLVDHIAKTDGFDLRHLRFLIIDEADRMIDNMHQDWL
NKVENAVYQVKECSASDSLFQRTKPGVCTAASHSQLQMPLQKLLFSATLTQDSEKLQQLA
LHQPQLFTSNYTPLESETHVTQSELQGPGDSIGKKYTLPEGLTEFIVPCNLRKKPLIILY
FALRMKFSRILCFTNSRDASHRLYLLLCAFGGIEVAEFSSRLSPNERRKTLKEFEKGKLQ
ILISTDASARGIDVKGVTCVVNYDAPQFIRTYIHRVGRTARAGKAGLAFTLLLKMQEQQF
LQMLRDAGSKEMKKHMVRQKFLTPLIERYENALQVFQQVLKDEKRRQRL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcaccatcaacaggtacctctgtgatgatgaacctgccaatagtccgcat
gatgagtcccgatcccaaactttgctgcagaagcttcgtcgagaggccaaggccagacag
caacagctggaggttaagagaggtcccatggatgaagaggggccgaagaaccaaagggaa
gatgagaatagaggaaggaagggcaaaaagaggaaaagagaagctgaagaagaggctaca
atttcagagaaaagcagaaagaaagcaaggcacctgtcaaatgaatctgaagacagcagc
aaaaatgggagacatgttggttcccaagtgctcaaatcagagaagggcagtgcaggcgta
agtgctaagcagttacataacaaaaaagtgaagaggaataacactggagtggagagaaaa
cgcaaacatcaagatcaaagcacaaacaatacagagacatccaacgaaactaataatgat
caggcgagaccgaacggagatctggaaaaaccagagcagaccgaagcgaaggagaaaagt
gatcaggatgagaaccatacgtcaactgattccaaatccagcctgatcattcttggaggg
tttcagaagaaaacgattcagaaggtgcatcgagtcttgccccagtggcttgctaagccc
atgctggtcaacaaggacattaaacagaatctaaacgcgatcgaaaatgttccaggaatc
catgagaaactgcttcagaaacttcgaaccaatggtatccattccttcttcccagttcaa
acagaggtaatccccatcctcctggagagcacaaagcatggactgtggctgggcagaggg
ggctacaggccgagagacatttgtgtatccgcacccactggtagtggcaagaccctggca
ttcgttatccccattgttcaggcgctgatgggccgtgtggtatgcagagttcgagccctg
gctgtgctcccaaccaaggaactggctcagcaggtatgtaaggtgttcaaaaggtatact
gaaggcctgggtctgaaagtagtgattgttgctggacagaaacaatttgctgtggagcag
gcctctcttgttgagcatacgtttactggctattgcagcttggcagacatcattgttgca
actccaggacgtttggttgatcacattgccaaaacagatggattcgatctgcggcatctc
cgattcttgataatcgatgaggcagatcgaatgattgataatatgcaccaggattggctg
aacaaagtagagaatgcagtataccaagtgaaagaatgttcagcttcagacagtttgttc
cagaggacaaagccaggagtttgcacagctgcaagccattcccaactgcagatgcccctg
cagaagctgctgttttctgccaccctcacccaggactctgagaaactgcagcagttggca
ctgcaccaacctcaactcttcacctccaattacacaccattggagagtgagacccatgtg
acccagagtgaactccaaggacctggggacagcattggaaagaagtacaccttgcccgag
ggcctgacggaattcattgtcccatgcaatcttagaaagaagcctctgataatcctctac
tttgccctgagaatgaaattcagtcgtatcttgtgtttcaccaactccagagatgcatca
cacaggttgtatcttttactttgtgcctttggtggcatagaagtggcagaattttcttcc
aggctttcccctaatgaaagacgaaagacactgaaagagtttgagaaaggaaaactccaa
atactgatcagcacagatgcaagtgctagaggaattgatgttaaaggtgtcacgtgtgtg
gttaactatgatgccccacagttcatcaggacgtacatccacagagttggtagaactgct
cgagctggaaaagctgggctcgcattcacactcctcctaaaaatgcaggaacagcagttt
cttcaaatgctgagagatgctgggagcaaagagatgaagaagcatatggtgagacagaaa
ttcttgactccattgatcgagcgctatgaaaatgctctgcaagtatttcaacaggttctt
aaggatgaaaagaggaggcaacgtctgtga
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