Chiloscyllium plagiosum (whitespotted bambooshark): 122562886
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Entry
122562886 CDS
T08871
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122562886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122562886
03041 Spliceosome [BR:
cpla03041
]
122562886
03032 DNA replication proteins [BR:
cpla03032
]
122562886
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122562886
Spliceosome [BR:
cpla03041
]
Complex A
U1 snRNP components
Sm proteins
122562886
U2 snRNP components
122562886
Complex B
U1 snRNP components
122562886
U4/U6.U5 tri-snRNP components
122562886
Complex C
U2 snRNP components
122562886
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122562886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
122562886
NCBI-ProteinID:
XP_043572144
LinkDB
All DBs
Position
25:52273601..52274865
Genome browser
AA seq
84 aa
AA seq
DB search
MSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGTGAGRGKAAI
LKAQVAARGRGRGMGRGNIFQKRR
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatattactgtcacctaccgggatgggcgcgtggctcagctagaacaggtctac
atccgtggcagcaagattcgcttcctaatattacctgatatgctgaagaatgcacccatg
ttaaagagcatgaagaacaaaaaccagggaactggggctggccgagggaaagctgccatc
ctcaaagctcaagtggctgctcgaggccgaggccgtgggatgggtcgtggaaacattttt
cagaagaggaggtga
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