Chiloscyllium plagiosum (whitespotted bambooshark): 122563077
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Entry
122563077 CDS
T08871
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122563077 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122563077 (nfasca)
Cell adhesion molecules [BR:
cpla04515
]
Immunoglobulin superfamily
L1 family
122563077 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
Pur_ac_phosph_N
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_6
DUF4998
BiPBP_C
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
122563077
NCBI-ProteinID:
XP_043572395
LinkDB
All DBs
Position
26:10276476..10576970
Genome browser
AA seq
1349 aa
AA seq
DB search
MLPRDRFLLHTGLVFIVSLCHLVTAIEVPLDPSLQRELAQPPTITKQSPKDYIVDPRDNV
VIYCEGKGNPTPAFSWTRNGKFFNVAKDSRVSMRSRSGTLTMDFRYSGRAEDYEGEYQCS
ARNDYGTALSHKIFLRVSKAPLWRKEVLDPFQVQEGAPLILPCQPPAGLPPPVIFWMDSM
MESIPQNKRVSQGLNGDLYFSNVVRSDARFDYICNARFLFTHTIQQKNPITIKVITMDTS
YESVSTILNETELSGARPITEQIPKFMSPAGTSSSRIILRGEDLLLECIASGIPTPDIIW
YKKGGELPWPKVRIENYNKTLRITDVSEENSGEYFCLASNKMGSIRHTITVRVKAAPYWL
NEPQNLVLAPGEYGRLVCQANGNPKPNIQWLMNGEPIEKVRQSPGREIDGDTIIFREAQI
GSSAVYQCNASNEHGYLLANAFVSILDVQPRILTRRNQIVKVIENNRTRLDCQFFGSPIP
TLRWFKDGQGNNLYGGNYIIHDNGTLELRRARKVDEGTYTCVATNILGKAENRVRLEVKD
PTRIIRAPESITVKRSLAAKFECKVRHDPTLRVTVTWLKDDKVLYLPWRMKKDEDSLTII
NVSERDEGIYTCVASTELDSDSAKARLTVLVVPSTQITPLAAVLKDRPDPPRDLELTDPA
DRSIRLTWIPGDDNNSPITEFIVQFEENRFQPRKWHNLTRISGSINSAVLQLSPYVNYQF
RVIAVNEVGEGAPSLPSERYQTTGTAPELNPSDVRGAGISKSSMQISWTPLNGTQISGPN
LKYIVSWRQKDVGGEWSTVTVPRSSYIVSPTPFFTPYEIKVQAVNDFGLGPEPRIVIGYS
GEDFPIAAPTGLSGRIINSTAILLQWRALPPDSVQGYLIGHKIQYWNEGSLLKTNQYRSR
VQVTESPSQRLRAIVSGLQPYHAYKFQVAAVNGRGRGPWSEEFAINTTEGVPGKPSYLRI
RQPDLESITLQWGPPRDPNGILTGYVIMYHPLTGSRSRRNATIPRLGPDVTTYKLERVDA
NIKYRFYVFAQTRQGLGEAIVLDSPDFENEVTPTPEIAKTIGVVSRFIPVPTTPAATTTL
TTITTTTATTSVAPPTVTITETAQPAVTGTHVYVEALGRIWNLTTSAGNDSVNITWSHTF
PREMAQFTVEYIHSNGTVKQEHIQTGQNSVRLLGLAPGTLYKLRVFSTLFPTVTSNTSTI
ETSPAFTNSHVDIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVKTTEENRPSQD
DNGYLSLESDNEDSKKPQGSQSSVDGTVKQEESDDSIVIYGDGDGNSRFGEDGSFIGQYT
VKKDKEETEGNDSSEATSPVNPAYSLAQM
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaagggataggtttcttctgcacactggcttggtgtttattgtgtctctgtgt
cacctggttacagccattgaagtcccccttgatccaagccttcagagagagttggcccag
cctccaaccattaccaagcagagtccaaaggattatatcgtagacccacgagataacgtg
gttatttactgcgaagggaaggggaacccaactccagccttctcgtggactcgcaatgga
aagttcttcaatgtcgcaaaagattccagagtgtcgatgcgatcgcggtcaggcaccctc
acaatggacttccgttacagcggccgggcggaggactatgagggggaataccagtgctca
gccagaaatgactatggaactgcactctcccacaaaatattccttcgagtctccaaggca
cccctgtggcgtaaggaggtcttagaccctttccaggtacaggaaggagcacccttgatt
cttccatgtcaacctcctgctggacttccccctcctgtcatcttctggatggacagcatg
atggaatcgatccctcagaataaacgtgtgtctcagggcctgaacggagacctctacttc
tccaacgtggtgcgtagtgatgcacgctttgactacatctgtaatgcccggttcctcttc
acacacaccattcaacagaaaaaccccatcaccatcaaggtgataaccatggataccagt
tatgaatctgtgtcaactattctgaatgaaactgaattgtccggtgctcggccaatcaca
gagcagattccaaagttcatgtcaccggcagggacgtccagcagcagaattattctccga
ggggaagacctgttactggagtgcatcgcttcaggaatacccacaccggatattatttgg
tacaagaaaggtggtgaacttccttggccaaaggtgcgaattgaaaattacaacaagaca
ttgaggatcactgacgtttctgaggagaactcgggcgagtatttttgcttagcatccaat
aaaatgggaagcatacggcacacaatcacagtgagagtgaaagctgctccatattggctg
aatgagccgcagaatttggtactggctcctggggaatacggcagattggtgtgtcaagcc
aatggaaaccccaagcccaacatccagtggctgatgaacggggaacccatagaaaaggtc
cgtcagagtccaggccgtgaaattgatggtgatacgatcatcttccgagaggcacagata
ggaagcagtgctgtgtaccaatgcaatgcctcaaatgagcatggatacttactggccaat
gcatttgtcagcattctcgatgtgcaaccaagaatattgactcgacgaaaccaaattgtc
aaagtgatagaaaataaccgaacaaggctcgattgtcagttctttggttcaccaatcccc
accctgcgatggtttaaggatgggcagggcaataatctttatggaggaaactatatcatc
catgataatgggactttggaattacgacgagcacggaaggttgatgagggaacctatacc
tgtgtagcaaccaacatactgggcaaggctgagaacagggtgcgactggaggtcaaagac
cctacaaggatcatcagggctccagaatctatcacagtgaagaggtcacttgctgcaaag
tttgaatgtaaagtgagacatgatcccacattaagagtgacagtgacctggctcaaagat
gacaaagttctgtatttgccttggaggatgaagaaagatgaggactctttaacaatcatt
aatgtgtctgaacgagatgaagggatctacacatgtgtcgctagcacagaactggacagt
gactcagctaaggcacgcctcactgttctcgttgtcccttctacccaaattaccccactt
gctgctgtgttgaaagatcgtcctgatcctccccgagatctggaactgacggatccagca
gatcgaagtataagattgacatggattcctggcgatgacaacaacagtccaattacagag
ttcattgtgcagtttgaagagaacaggtttcagccgagaaagtggcacaatttgacccga
atctcaggcagcatcaactctgccgtattacagctctctccatacgttaactaccagttc
cgggtgatagcggtgaatgaagttggagaaggtgcccccagtttgccttctgaacgttat
caaacaactggaacagctccagaactcaatccatctgatgttagaggggcaggaatatca
aaatcaagcatgcaaatcagttggacgcctctgaatggaacacaaatcagtggcccgaat
ctcaagtatatagtcagctggagacaaaaggatgtaggtggggagtggtcaacagtcacc
gttcccaggtccagttacatcgtctctccgactcccttctttacgccctacgagattaaa
gtgcaggcagtgaatgattttgggttaggtcccgaaccaaggattgtgattggatactcg
ggtgaagactttccgattgcagcacccactgggctttctggaaggattattaacagcact
gccattctactccagtggagggcactaccaccagactctgttcaaggatatctcattggc
cacaaaattcaatattggaatgagggaagtctgctgaagaccaaccaatacaggtcacgt
gttcaggtcacagagtctcccagtcagcgtctgcgtgccattgtatcaggcttgcagcca
tatcacgcctataagtttcaggtggcagcagtcaatggtcggggacgtggtccctggagt
gaggagtttgcaataaacaccacagaaggagttcctggaaaaccaagttacctcagaatc
aggcagccagatttggagagcattacgttacagtggggtcctccacgtgatccaaacgga
atcctcaccggctacgtgatcatgtaccacccactgactggttcaagatcaagacgcaat
gccaccattcccagacttgggcctgatgtgaccacctataaattggagagagttgacgca
aacattaagtacaggttttacgtcttcgctcaaacccgccaaggactaggcgaagcgatt
gtgttggattcacctgactttgaaaatgaagtcacccctactcctgagattgcaaaaaca
atcggagtcgtgtcaagattcatacccgtcccaactactcctgctgcgaccaccacctta
actaccataactaccacaaccgctacaaccagcgttgctcccccgactgtcaccatcact
gagacagcccaaccagccgtcacgggcacccatgtttatgtggaagctctcggtaggata
tggaatctcactacgtcagcaggaaatgactccgtcaatatcacatggagtcacaccttc
ccaagggaaatggcacagtttacagttgaatacattcacagtaacggcacggtgaagcaa
gagcacatccaaacgggtcagaactctgtccggcttctgggtctagctcctgggactctg
tacaaactcagggtgttttccaccctgttcccgacagttaccagcaataccagcaccatt
gagaccagcccagcttttactaatagtcacgtggacatcgcaacgcagggctggttcatt
ggcctgatgtgtgctgtggcactccttgtgctgattctgttgattgtgtgcttcataaag
aggagcagaggaggcaaatatccagttaagacgacagaagaaaatcggccctcacaagat
gacaatggatacctatctctagaaagtgataatgaagacagcaagaagcctcaaggcagt
cagtcttcggtggatgggacagtgaagcaagaggagagcgatgacagcatagtcatctac
ggtgatggggatggcaattctcgctttggcgaggacggttccttcatcggtcagtacacg
gtcaaaaaggacaaagaggagaccgagggtaatgacagctccgaagctacgtctccagtc
aatcctgcctattccttggcacaaatgtga
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integrated database retrieval system
