KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122563296
Entry
122563296         CDS       T08871                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122563296 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpla03041]
    122563296 (bcas2)
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122563296 (bcas2)
Spliceosome [BR:cpla03041]
 Complex B
  Other components
   Prp19 complex
    122563296 (bcas2)
 Complex C
   Prp19-CDC5 complex
    122563296 (bcas2)
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122563296 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 PIN-TPR-GreABC Mbeg1-like HisKA INO80F CENP-F_leu_zip DUF3450
Other DBs
NCBI-GeneID: 122563296
NCBI-ProteinID: XP_043572934
LinkDB
Position
26:complement(43112626..43155097)
AA seq 225 aa
MAGPLAVAGDVVVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDYSA
FETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMSQHGSNAWKVYNDNLVQMIENAQKELQRLRKQIQDLNWLRKNDQLAAGNKLRE
MESNWVTLVSKNYEIERAIVQLEGEINKMKQAQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcccgctggcggtggccggggacgtggtggtggatgcgttgccttatttcgat
cagggttacgatgcgccgggtgtccgagaggcggcagctgcgctggtagaggaagagact
agacgttatcgacctacaaaaaactatctgagctatttgcctacacctgactattcagca
tttgaaactgagatcatgaggaatgaatttgagcgattggcagctcgccaaccaatggag
ctactcagtatgaaaagatatgagctgcctgccccatcctcgggacagaagaatgacatc
actgcatggcaagagtctgtgaacaactccatggctcagctagaacatcaggcagtgaga
attgaaaacttggagctaatgtcacagcatggatcaaatgcatggaaagtctataatgac
aatctggtgcagatgattgaaaatgctcagaaggaacttcagagactgaggaaacagatt
caagatctgaactggctgaggaaaaatgaccagctggctgctggcaataaactacgtgaa
atggaatccaactgggtcacattagttagcaagaactacgagatcgagagagcaatcgtc
cagctcgagggtgaaataaacaagatgaaacaagcacaaggggatgaaaacaaagaaaat
attcggcaggacttctga

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