KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122563491
Entry
122563491         CDS       T08871                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122563491 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpla03021]
    122563491 (taf12)
   03036 Chromosome and associated proteins [BR:cpla03036]
    122563491 (taf12)
Transcription machinery [BR:cpla03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122563491 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     122563491 (taf12)
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     122563491 (taf12)
    STAGA complex
     122563491 (taf12)
    TFTC complex
     122563491 (taf12)
    SAGA complex
     122563491 (taf12)
    SLIK complex
     122563491 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 TAF10
Other DBs
NCBI-GeneID: 122563491
NCBI-ProteinID: XP_043573212
LinkDB
Position
27:complement(5426294..5470116)
AA seq 225 aa
MNSSLSGPTAVADVIKDLDSQIALIGPGPHNPKQKQDLEKLNDLKAKAQQIMNQFGPAAL
INLTTFPSVKPDPSSTPPPNTMANSTAVVKIPGTPGSGGRMSPEGNQNLSLTSWYKDEAM
VLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDV
QLHLERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaactcttcattatctgggcctacagcagtagctgatgtgattaaagatctagactct
cagatagcactgattggtcctggcccccacaaccccaaacagaaacaggatttggagaaa
cttaatgatttgaaggccaaagcccaacagattatgaaccagtttggacctgcagcgcta
ataaatttgacaacttttccctcagtaaaacctgatccatccagcacaccacctccaaat
acaatggctaatagcactgctgtggtaaagatacctggaacaccaggctcagggggacgt
atgagtccagaaggcaatcagaatttatccctaacctcctggtataaagatgaagcaatg
gtgttaagcaagaagaagctacaggacctggtgcgagaaattgatccaaatgaacaactt
gatgaagatgtcgaagaaatgcttttgcagattgctgatgattttattgaaagtgtagtg
agtgctgcatgtcaactagcacgtcaccgcaagtcaaacacactggaagtaaaggatgtt
cagttgcatcttgaacgccagtggaacatgtggataccaggatttggttcagatgaaatt
aggccgtataagaaggcctgcacaacagaagctcacaaacagagaatggcactgatacgt
aaaacaaccaaaaagtaa

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