Chiloscyllium plagiosum (whitespotted bambooshark): 122563500
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Entry
122563500 CDS
T08871
Name
(RefSeq) syndecan-3-like
KO
K16337
syndecan 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122563500
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122563500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpla00535
]
122563500
Proteoglycans [BR:
cpla00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122563500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
DUF1993
Motif
Other DBs
NCBI-GeneID:
122563500
NCBI-ProteinID:
XP_043573231
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All DBs
Position
27:6736657..6949668
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AA seq
383 aa
AA seq
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MGRLPVLCLCLCLLSSSLCHIGMTYHTSRQTQDLATLTDLEGSGSDDEDENVYSGSGGSG
YFEFDTELRFTTRMARPVTSPPSTTSFGSLQPIAFTFQSTSLAGDSTASSPTPSASTLTM
AATSTMAPVPITMPAAASTTTLLATTTSASTTASATTTSTVAMPTARTIAIVPLATAAAS
TVQSTTRSATRVSEVARPASTADAHTSQASLASFTESTWKTLSHVPYITEHAQKDDSSEI
VKVTTVNNEVEAPAAGSPSGDFEITEEGEVINPEANNEVFAVVTQPTRRGTGKKGLPNDI
DNAIDSGSSSSAAQLPQKNILERKEVLVAVVVGGVVGALFAAFLVMLLIYRMKKKDEGSY
TLEEPKQASIAYQKPDKQEEFYA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggcagactcccagtgctctgcctctgcctctgcctcctcagctccagcctgtgtcac
attggaatgacctaccacacatcccgacagacacaagatctggcaacgttaacagatctc
gaaggatcagggtcagatgatgaggatgaaaatgtctactctggttctggaggatcaggc
tactttgagtttgacactgagctgcggtttaccacccgcatggccaggccggttacctct
ccgccatccaccacatccttcggctcgcttcagccgattgccttcaccttccaaagtact
tctctggcgggcgacagcacggccagttcacccacaccatccgcctccactcttaccatg
gcagcaacctcgacaatggcgccagtccccatcaccatgccagctgctgcctccaccaca
actctcctggcaacgaccacaagcgcctcgacaaccgccagcgccaccaccaccagcacc
gtcgccatgccgactgcccgtaccatcgccattgtgccactcgctactgcagcagcatcc
acagtgcagtcaaccacaaggagtgccaccagagttagtgaggtggccagaccagcgtcg
acagcagatgcacacacgagccaagcttcattggcaagcttcacagagagcacttggaaa
accctctcacatgtcccttacatcacagagcacgcacagaaagatgactccagtgaaata
gtcaaagtgacgactgtcaacaatgaggtggaggctcctgctgcaggaagtccgagtgga
gactttgaaatcaccgaggaaggggaagtgatcaatccagaggcaaataatgaagtgttc
gctgtcgtcacacaaccaaccaggaggggcactgggaagaaaggcctccccaatgacata
gacaatgcaatagattcggggagctcatcttcagctgcacagttaccccagaaaaacata
ctggagaggaaagaggtgttagtagcggttgttgtcgggggggtagttggagcactcttt
gctgccttcctggtcatgctgctgatctatcgaatgaagaaaaaggacgagggaagctac
acattggaagagccgaagcaggcgagcatagcttaccaaaaacctgacaaacaggaggag
ttttatgcataa
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