Chiloscyllium plagiosum (whitespotted bambooshark): 122563542
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Entry
122563542 CDS
T08871
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04020
Calcium signaling pathway
cpla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122563542 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122563542 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cpla04030
]
122563542 (ptafr)
G protein-coupled receptors [BR:
cpla04030
]
Rhodopsin family
Others
Platelet activating factor
122563542 (ptafr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srv
CitMHS
7TM_GPCR_Str
Motif
Other DBs
NCBI-GeneID:
122563542
NCBI-ProteinID:
XP_043573341
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All DBs
Position
27:11252323..11277632
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AA seq
355 aa
AA seq
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MMNSFDNNISYATVIGLAYNSNTSCHIDAEFRYILFPIVYSLVFVLGLVGNCYVLWVFKR
LSPANSMTEIKIFMVNLSVADLLFILTLPFWVVYYSTKGHWIFREIPCRVAGCLFFINTY
CSIAFLAVISYNRYCAVAHPIETVQKNGRKRGIIISTIIWTVIVVSAAPFLFQDGTNNVN
GVIRCFEGYDKNSALPVVIIHFILIGAFFIAFLIIVICNLLILNLLSTKAAQPSRSEKVK
KQAFRMVCAVITVFCICFLPHHLVHGPWTLSVLGLWRVEDCVFRRAVNDAHQITLCLMGL
NCTLDPIIYCFLTKKFRRFLTQRLSKWKSTRKSIRTISTETNIDGDIALHNTCNS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcatttgacaataacatctcatatgccactgtcattggccttgcttacaac
agcaacacaagctgccacattgatgctgaattcagatacatactgtttcctattgtctac
agtctcgtcttcgtcctaggactcgttgggaactgctatgtgctgtgggtgtttaaacgg
ctgtctcctgcaaacagcatgactgagattaaaatcttcatggtgaatctgagtgtggct
gacctactgtttatcttgacgcttcctttttgggtagtgtactacagtactaaaggacac
tggatctttagagagatcccctgtagagtggctggctgtctattttttatcaatacctac
tgctccattgcgtttctagcagtgatcagttataacagatactgcgctgtggcacacccc
atcgagacagttcagaaaaatggcaggaagagaggcattattatatcaacaattatctgg
actgtaatcgttgtcagtgcagcccccttccttttccaagatggaaccaacaatgttaat
ggtgtcattcgttgcttcgaaggatatgacaagaattcagccttgcccgtggtcatcatc
cactttatcttgattggagctttcttcattgcctttcttataatagtcatctgcaacttg
ctcatcctaaacctgctatcgacaaaagcagcccagccgagcaggagtgagaaggtgaag
aagcaagctttccgtatggtgtgtgctgtcatcaccgtgttctgcatctgctttctcccc
catcatctggtccacggcccctggaccctctccgtcctgggactgtggcgggtagaggac
tgtgtgttcagacgggcagtgaacgatgcacatcagatcacgctgtgtttgatgggtctg
aactgcacactggatcctatcatatattgctttctgaccaagaaattcaggagatttttg
acacaacgtctaagtaaatggaaaagtaccaggaagagcattaggaccatttccacagaa
accaatatagatggagacatagctttacataacacgtgcaactcatga
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