Chiloscyllium plagiosum (whitespotted bambooshark): 122563674
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Entry
122563674 CDS
T08871
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122563674
03036 Chromosome and associated proteins [BR:
cpla03036
]
122563674
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122563674
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122563674
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122563674
microRNA pathway
RISC loading complex
122563674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
bpX4
Motif
Other DBs
NCBI-GeneID:
122563674
NCBI-ProteinID:
XP_043573658
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All DBs
Position
27:26498474..26631506
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AA seq
877 aa
AA seq
DB search
MEIGTPGAVGAQPLFTVPRRPGCGTMGKPIKLLANCFQVDIPKIDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVQIFGERRPVYDGKRSLYTADPIPVSTTGVDLEVTLPGEGKDRIF
RVSIKFVSRVSWHLLHEVLTGRSMPELLPGLDLDKPLSTNPVHAVDVVLRHLPSMKYTPV
GRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV
LDIHNIDEQPRPLTDSHRVKFTKEIKDKLLTGLKVEVTHCGPMRRKYRVCNVTRRPASHQ
TFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRC
IKKLTDNQTSTMIKATARSAPDRQEEISKLVKSANYDDDPFVQEFQFKVRDEMAHVTGRV
LPAPMLQYGGRVEPSHFRLQTNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFAAQRQC
REEVLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLVIVIL
PGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQ
RPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDL
ASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYCELLAIREACISLEKDYQPGI
TYIVVQKRHHTRLFCADKNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRP
SHYHVLWDDNCFSADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEH
DSAEGSHISGQSNGRDPQALAKAVQIHQDTLRTMYFA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaaccccaggagctgttggggctcagccccttttcacggtgccaaggcgt
ccaggatgtggcaccatgggaaagccgattaaactgctggccaactgcttccaagtagat
atcccaaagattgacgtctacctctatgaggtagatattaaaccagataaatgtcctcgc
agggtaaacagggaagtagtcgactctatggtccagcattttaaagttcagattttcgga
gaaagaagacctgtctatgatgggaaaaggagtctctacactgcagatcccattcccgtc
agcaccactggagtggatttggaggtgacgttaccaggagaagggaaggaccgaattttc
agggtgtcgattaaatttgtttcaagagtgagctggcatttgctgcatgaagttctgaca
ggccgcagcatgccagagctgctgcctgggttagacctggacaaaccactcagcacaaat
cctgtacatgctgtcgatgttgtcctccgacacctcccttccatgaagtacacccctgtt
ggccgctctttcttctctgcacctgaaggttatgaccatccattgggtggaggtagagaa
gtctggtttggtttccatcaatctgtcagaccagccatgtggaaaatgatgctgaacata
gatgtttctgccactgctttttataaagcacagcctgtaattcagttcatgtgtgaagtt
ctagacattcataatattgatgaacagccacgacctttgacagattcccaccgagtcaaa
ttcaccaaagagataaaagacaaacttctcacaggattgaaggtcgaagtaactcattgt
ggacctatgaggagaaagtaccgtgtgtgtaatgttaccaggagaccagctagccatcag
acgttccccttgcaactggaaagtggacagactgtagagtgcacagtagcacaatatttc
aagcagaagtacaaccttcagctaaagtacccacatctgccctgtctacaggtgggacag
gaacagaagcacacctacctaccacttgaggtgtgtaacattgttgcgggacagcgctgt
atcaaaaaactgacagacaatcaaacatcaaccatgattaaagcaacagcacggtcagca
cctgacagacaagaggagattagtaaacttgtaaaaagtgcaaactacgacgatgatcct
tttgtccaggaatttcagtttaaagtgagagatgagatggctcatgtcactgggcgagta
cttccagctcccatgctgcagtatgggggaagggtggaaccaagtcatttcagattacaa
actaatcgaacggttgctactccaagtcatggtgtttgggacatgagggggaaacagttc
catactggggttgaaatcaaaatgtgggcaatagcatgttttgcagcacagagacaatgt
agagaagaagtacttaagagttttactgaccagctacggaaaatatcaaaggatgcgggg
atgcctattcagggccagccatgtttctgcaaatatgcgcaaggagctgacagtgtagag
ccaatgttccggcatctgaagaacacctattcaggactccagcttgttattgttattcta
ccggggaaaacacctgtctatgccgaggtgaagcgtgtgggagatactctcctaggaatg
gctactcagtgtgttcaagtgaagaacgttgtcaaaacgtctccacagacattatcgaac
ctctgcctgaagattaatgtgaaactaggtggtattaacaacattctcgtgccacatcag
cgaccatccgtattccaacagcctgtgatctttctgggggctgatgtcacacacccacca
gctggagatggcaagaaaccttctattgctgctgttgtgggcagtatggatgcccatcct
agtcgttactgtgccactgtgcgcgttcagagacctcgacaggagatcattcaagaccta
gcttcaatggttcgagaacttctcattcagttttacaaatcaactcgcttcaagcccact
cgaattatattctaccgtgacggtgtttctgagggccaattccgtcaggtattgtattgt
gagctattggcaattcgagaagcctgcatcagcttggaaaaggactatcagcctggcatc
acatacattgtcgtgcagaaacgtcatcacactcgattgttctgtgctgataagaatgaa
agggttggaagaagtggaaatattccagcaggcacaactgtagacacagatatcacccac
ccatatgaatttgatttttatctctgcagccatgctgggatacagggtacaagtcgtccc
tcacattaccatgttttgtgggatgacaactgcttctctgcagatgaacttcagctcctc
acctatcagctatgtcacacatacgtgcgctgcacacgctctgtctctatcccagcacca
gcctattatgcacatctagtggcatttagagcaagataccacttggtggataaagagcat
gacagcgctgaaggcagtcacatttccggacagagtaacggacgtgacccacaggctctt
gccaaggctgtgcagatccaccaggataccttacgcacaatgtacttcgcttga
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