Chiloscyllium plagiosum (whitespotted bambooshark): 122563733
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Entry
122563733 CDS
T08871
Name
(RefSeq) ribonuclease ZC3H12A isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122563733
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122563733
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
122563733
NCBI-ProteinID:
XP_043573820
LinkDB
All DBs
Position
27:complement(36010629..36035200)
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AA seq
732 aa
AA seq
DB search
MTPVQQSVERTDLGVIGMHLLGLVNGEPCKQSLDLDLKERGVSLQENMNLAEHAQYSHKP
SLDFPNWTKNFLVDSSHPSRTNPTKQKLTLSEVQSNDECKSNSSKESRTGNKLEAEFGRK
QEVEESPAQNSPDSSELQMKVDFFRKLGYSAEQIHMVFQKVDSSADTNTILGELVKAQGT
MEKEHAPEEVPVPILVSRGGPSAKVPAGGPVTEELQEQKVNLRAIVIDGSNVAMSHGNKE
VFSCHGIQLAVNWFLERGHKDITVFVPSWRKEQPRPDVPITDQHILRELEKRKILVFTPS
RRVGGKRIVCYDDRFIVKLAYETDGIIVSNDTYRDLQNEKPEWKKFIEERLLMYSFVNDK
FMPPDDPLGRHGPSLDNFLRIKPVIPEHKRQHCPYGKKCTYGIKCKFYHPERINQPQRSL
ADELRATARSSPTKSLNSASPHKEEKKASVPKRPTYTESGPATFNQTDNISGKRLSPERQ
HAAQIANPPESSAMLKGIAQTKQSSNTNAEWFNHTAFDNTSTNSVCSNAHKSYDEGFVSF
EKEFSDIWPSRSQSHSEPYSINNGQYYLPTHSLDHHQYSYHSHESMPSIGACGYPPHNPP
SSSHCCMAIGRMSIHPQFSLPSDFNSPGSQRPRSCWPDPHQISSNSRSSSLPDPHGWALK
RCDQQLMDPYWKNSQWPSHDHCREERETVRMKLCAIFQPHLVDTVMKQYPHLLDPQELAA
TILAYKSQTPNI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgactccggtccagcaatcagttgaacgcacagacttaggtgtgattggaatgcaccta
ttgggactagtaaatggagaaccgtgcaaacagagtctggatttagatttaaaagaacgt
ggagtctctctacaagagaacatgaatttggcggaacatgcacaatacagccataaacct
tccttggatttccctaactggacaaagaatttcctggttgattcctcccatccatcaagg
actaatcctaccaagcagaaactgactttgagtgaagtccagtcaaatgatgaatgtaaa
agtaacagttcaaaagaatccagaacgggtaataaactagaggcagagttcgggagaaag
caagaggttgaggaatccccagcacagaattcccctgactcctccgaattgcagatgaaa
gtggacttctttcgtaagttgggttactcagcggagcagattcatatggttttccaaaaa
gtggacagtagcgccgataccaacaccatactcggagaactagtgaaggcacaaggcacg
atggaaaaggagcacgcaccagaagaagtgcctgtacctatcctggtgtctcgtggaggt
ccttcagccaaagtcccagctggtggaccagtgaccgaagagctgcaggagcagaaagtc
aacttgcgagcaattgttatagatggcagcaatgttgctatgagtcacgggaataaagag
gtattctcctgtcatggcattcagctggctgtgaactggttcctggaaagaggtcacaaa
gatatcactgtatttgtcccatcttggaggaaggagcaaccaaggcccgatgtgccaatc
acagaccagcacatccttcgagagcttgaaaagagaaagatacttgtcttcacgccatcg
cggcgagttggtgggaaaaggatcgtctgttacgatgatcgttttattgtcaaactggca
tatgagacggatggtatcattgtttcaaatgatacctaccgggacctgcagaatgaaaaa
cctgagtggaagaagttcattgaagagcgtctgctgatgtactcatttgtgaatgacaag
ttcatgccccctgatgacccccttgggcgtcatggtcctagtttagataatttcttacgt
atcaagcctgtaataccagagcataagcgacaacactgcccctacggcaaaaagtgtact
tatggcatcaaatgtaaattctaccacccggagcgaattaaccagccccaacgttcttta
gcagatgagctccgtgctacagcgaggtcctctccaactaagagcctcaattctgcaagc
ccacacaaagaagagaaaaaggcaagtgtgccaaagcggccgacatataccgaaagtggt
ccagccacttttaatcaaactgacaatatctcagggaagaggctcagcccagaaagacaa
cacgcagcacagattgcaaacccgcctgagagcagtgcaatgttaaaaggaattgcacaa
accaagcaatcatcaaatacaaacgctgagtggtttaatcatacagcctttgacaacacc
tcaaccaattcagtatgttcaaacgcacataaaagttacgatgaaggctttgtgtcattt
gagaaagaattctctgacatctggccttctagatctcaaagtcacagtgagccatactct
ataaacaatggacagtattatttaccaacccacagtttagaccatcatcaatacagctat
cattcccatgagtcaatgccatcaatcggagcttgtggttaccctcctcataatccaccc
agtagctcgcactgttgcatggccataggcagaatgtcaatccatccacagttcagtcta
ccaagtgactttaattcgccaggctcgcagagaccacgaagctgttggcctgacccacac
cagatctcatcaaacagcaggtcaagcagtcttccagatcctcatgggtgggcactgaaa
agatgtgaccaacagctcatggatccctactggaaaaatagccaatggccatcacatgac
cactgcagagaggagcgggagactgtccgcatgaagctatgtgccattttccaaccccac
ctcgtggatactgttatgaaacaatacccacaccttttagacccccaagagttagctgcc
acaattctagcttataaatcccaaacccctaatatttaa
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