Chiloscyllium plagiosum (whitespotted bambooshark): 122563905
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Entry
122563905 CDS
T08871
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04142
Lysosome
cpla04144
Endocytosis
cpla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122563905
04142 Lysosome
122563905
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122563905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122563905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122563905
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122563905
Exosome [BR:
cpla04147
]
Exosomal proteins
Proteins found in most exosomes
122563905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
122563905
NCBI-ProteinID:
XP_043574068
LinkDB
All DBs
Position
28:complement(5943332..6005748)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNEPNN
PIRRPISADSAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMVDDVTFWKWISLNTI
ALVTDSAVYHWSMEGESQPMKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSLDRKVSQPIEGHAAAFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFAKKAVDVFFPPEAQNDFPVAMQISAKHDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAGHDATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNALFAQGNYSEAAKIAANAPKGILRTPDTIRRFQSVTAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDIVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYSPDWIFLLRNVMRVGPDQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSVECLRAMLSANIRQNLQICVQVASKYHEQLGTQQLIELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDMELINVCNENSLFKSLSRYLVRRKDPELWASV
LQETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKEMVKEAIDSYIKADDPSSYME
VVEAANKSGNWEDLVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDHMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVEGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKYKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYF
TKVKQLNLVKPYLRSVQSNNNKSVNESLNNLFIQEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIGAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLE
DGKNECFASCLFTCYDLLRPDVVLELSWRHNIMDFSMPYFIQVMREYLTKVDEIKKKVDK
LDISESLRKEEEQATETTPIVYGQSQLMLTAGPSVSVPPQAAYGYSYGAQPYAQPGTYGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctgcctatccgcttccaggagcacctgcagctccaaaatctgggcatc
aatcctgcaaacattgggttcagcacccttactatggagtctgataaattcatctgcatt
cgggagaaagttggtgagcaagctcaagtagtcataattgatatgaatgaaccaaacaat
cctattcgccgtccaatctctgctgacagtgctattatgaacccagccagcaaggttatt
gcattaaaagatgctggaaaaacactgcaaatatttaatatagaaatgaaaagtaagatg
aaggctcacactatggtggatgatgtcactttctggaagtggatctctctcaatacaatt
gccttggtaacagactctgcagtgtatcactggagcatggagggagagtctcagcctatg
aaagtttttgatagacactctagtctagcaggctgccagatcatcaattaccgcactgat
gctaagcagaaatggttactgctcattggcatctctgcccagcaaaatcgtgtggtggga
gcaatgcagctttactcattagacagaaaggtatctcagccaattgaaggtcatgcagca
gcctttgcgcaattcaagatggaaggcaatgcagaagagtcaacattattctgctttgca
gtcagagggcaagcaggagggaagcttcacattattgaggtgggtactcctcctacagga
aaccagccctttgccaaaaaagcagtagatgtcttcttcccaccagaggcacaaaatgac
tttcctgttgcaatgcagataagtgcaaagcatgatgttgttttcttgatcaccaaatat
ggatacatccatctatatgacttggagactggcacctgtatctacatgaacagaatcagt
ggagagaccatctttgttacagcaggacatgatgctacatctggaataattggagtgaat
agaaagggtcaggtattatctgtctgtgttgaggaagaaaacatcatcccttacatcacc
aatgtgttgcagaacccagaccttgcactgcgcatggctgtgcgcaataatctagctggg
gcagaagagctctttgctcgcaagttcaatgctctctttgctcagggaaactattcagag
gcagcaaaaatagctgcaaatgcaccaaagggtattttgcgcactccagacactattcgt
cgttttcagagtgtaactgctcagccaggacagacatcccctttgcttcagtactttgga
atactgcttgatcaaggacagctgaacaaatttgagtctttggagttatgtaggccagtg
ttacagcaggggcgtaagcagttgcttgagaagtggctaaaagaagataagctggagtgc
tctgaggagcttggtgatattgtgaagtctgtggatcccacactggcattgagtgtctac
ctgagggcaaatgtccccaacaaagtgatccagtgttttgcggaaaccggtcagtttcag
aagattgtgctgtatgcaaagaaagttggttactctcctgattggatatttctactgagg
aatgtaatgagggttggccctgatcaaggacttcaatttgctcagatgttggttcaggat
gaagaacctcttgcagatatcacccagattgttgatgtgttcatggaatacaacctgatc
caacagtgcacttcctttttgctggatgccctcaagaataaccgtccatcagaaggacca
ttgcagactcgcctcctggaaatgaatcttatgcatgcacctcaagttgcagatgctatt
cttgggaaccagatgttcactcactatgatcgtgcacacattgctcagctctgtgaaaaa
gctggactactacaaagagccctagaacattatacagatctgtatgatattaagcgtgct
gtggtgcacactcatctgctaaatcctgagtggcttgtcaattacttcggctccctgtct
gttgaagattctgttgaatgtctacgtgccatgctgtctgctaatatccgtcagaatctg
cagatttgtgtgcaagtagcttccaaataccatgaacaacttggtacacagcagctgatt
gaactgtttgaatctttcaagagttttgaaggcctattctattttttgggctccattgta
aatttcagtcaagatccagaagtccatttcaagtacattcaggctgcttgtaaaactgga
cagatcaaagaggtggaacgaatttgtcgggagagcaattgctatgatccagaacgtgtg
aagaacttccttaaggaagccaaactgactgaccagctgcctctgattatcgtttgtgat
cgtttcgacttcgtgcatgatctggtgttgtacctgtaccgcaacaaccttcagaagtat
attgagatatacgttcagaaggtaaacccaagtcgtctgccagttgtggttggagggctt
ctggatgtagattgttcagaagatgtcattaagaacttaattcttgttgtacgtggacaa
ttctctactgatgagctggttgctgaagtagaaaaaaggaacagactgaagttgctgctg
ccctggctggaatcgcgcattcatgaaggctgtgaggaacctgctacccacaatgcactt
gctaaaatttacattgacagcaacaataaccctgagcgcttcctccgggagaacccatat
tatgatagccgtgtggttggtaaatactgtgagaagagagacccccacttggcttgtgtg
gcctatgagcgtggccagtgtgacatggagctcatcaatgtgtgtaatgaaaactctctg
ttcaagagcctatcccgttacttagtccgtcggaaagatcctgagctctgggcaagtgtc
ttgcaagagactaatccttataggagacctcttattgaccaggttgtacaaacagctctg
tcagaaactcaagaccctgaggaggtttctgttactgtaaaggctttcatgactgctgac
cttccaaatgaactaattgaattgctggaaaaaattgttttggacaattctgtcttcagt
gagcacagaaatctgcagaacttgctgattctcactgctatcaaagctgaccgtacccgt
gtgatggagtacattaatcgtctggacaactatgatgcacctgacattgccaatatagcc
attagcaatgaactctttgaagaagcatttgctatctttagaaaatttgatgtgaataca
tctgcagtgcaggtgctgattgaacacattggaaatctggaccgtgcctatgaatttgct
gaaaggtgcaatgagccagcagtatggagccaacttgctaaagcccagcttcaaaaagag
atggttaaagaggccattgactcctatatcaaggcagatgacccatcatcctacatggag
gttgtagaagcagccaacaaaagtggtaactgggaggaccttgtaaagtacttgcaaatg
gctcggaagaaggcccgtgagtcttatgtggagactgaacttatttttgcactggcaaaa
accaaccgtttagcagaactggaggagtttataaatggtcccaacaatgctcacattcag
caagtgggtgatcgctgctatgacgaccatatgtacgaagctgctaagctgttgtacaat
aatgtgtccaactttggccgcttggcatcaaccctggttcatctaggggaatatcaggct
gcagtggatggtgcccgcaaagcaaacagcactcgtacttggaaggaggtatgttttgcc
tgtgttgagggaaaggagttccgtctggctcagatgtgtggtctccatattgttgtacat
gctgatgaactggaggaacttattaactattaccaggaccgtggttactttgaggaactg
atcaccatgttagaggcagcacttggtctggaacgtgctcatatgggcatgtttactgaa
ctggctatcctatactccaaatacaagcctcagaagatgagggagcacctggagctcttc
tggtccagagtcaacattcccaaggtactgagagctgctgagcaggctcacttgtgggca
gagctagtcttcctgtatgataagtatgaagaatatgacaatgctatcattactatgatg
aaccatccaactgatgcatggaaggagggacagttcaaggacataattaccaaggtggcc
aatgtagagctctattacaaagcaacacagttctacttggagtttaagcctttattactg
aatgacctactgatggtgctatcccctcgtctggaccacacacgtgctgtgaactacttt
actaaggtgaaacagctaaatttggttaaaccttacctgcgctctgtacaaagtaacaac
aacaagtctgtgaatgaatcattgaataatctcttcatccaagaggaagactaccaggct
cttcgcacatccatagatgcatatgacaactttgataacatctccctggctcaacggctt
gagaagcatgagctaattgagttccgacgaattggtgcgtatctgttcaagggcaacaac
cgttggaagcagagtgtggagctatgcaagaaagacaggctgtataaagatgctatgcaa
tatgcgtcggagtccaaggatactgagctagcagaagaactgcttcagtggttccttgag
gatgggaagaatgagtgctttgcttcttgtctatttacttgctatgacttgttgaggcca
gatgttgtgcttgagctgtcttggaggcacaacatcatggatttctccatgccttacttc
atccaggtgatgagggagtatcttacaaaggttgatgaaataaagaaaaaggtggataag
ttggacatctctgaatcgctgaggaaagaggaggaacaggctactgagacaacccccatt
gtttatggtcagtcacagctaatgttgacagcaggacccagtgtgagtgtccctccacag
gctgcctatggctacagttatggtgcccaaccatatgctcagcctggcacatatgggtat
agtatgtaa
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integrated database retrieval system
