Chiloscyllium plagiosum (whitespotted bambooshark): 122563957
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Entry
122563957 CDS
T08871
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00565
Ether lipid metabolism
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
122563957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122563957
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122563957
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122563957
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122563957
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_RIG_2nd
eIF2A
LisH
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Nucleoporin_N
Pox_A_type_inc
Beta-prop_NUP159_NUP214
LisH_PAC1
LisH_2
DUF2570
Motif
Other DBs
NCBI-GeneID:
122563957
NCBI-ProteinID:
XP_043574238
LinkDB
All DBs
Position
28:12135723..12223650
Genome browser
AA seq
414 aa
AA seq
DB search
MVANSPPCRRRLSSGNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWT
SVIRLQKKVMELESKLNEAKEEFTSAGPLGQKRDPKEWIPRPPERYSLSGHRSPVTRVIF
HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQNGKLLASCSADMTIKL
WDFQSFECIRTMHGHDHNISSVAIMPNGDHIVSASRDKTMKMWEVQTGYCVKTFTGHREW
VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYPTILEA
TGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGTLFHPGGKFIVSC
ADDKTIRVWDYKNKRCMKTLNAHEHFVTSLDFHKTGPFVVTGSVDQTVKVWECR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctaatagcccgccgtgtcgaaggcgactttcttcaggaaatcgagctatagct
gactatcttcggtctaatggatatgaagaggcatattcagtttttaaaaaggaggcagag
ttagatatgaatgaagaattagataagaaatatgctggactgctggagaagaaatggacc
tctgtgataagattacaaaagaaggttatggaattagaatccaaacttaatgaggcaaaa
gaagagttcacttcagccggccctctgggtcaaaaacgtgatccgaaagaatggatccct
cgtcctccagagagatactctctgagtggacatagaagtccagtcacacgggttattttc
catccagtcttcagtgttatggtatcagcctctgaagatgccacaataaaggtttgggac
tatgagactggagattttgagcgtaccctgaaaggtcacacagactctgtacaagatatc
tcctttgatcagaatggcaagctgctggcatcctgctctgctgatatgaccatcaagctt
tgggatttccagagttttgaatgcattcggaccatgcatggccatgatcataatatttca
tcagtagctatcatgcctaatggagatcatatagtgtctgcttcaagggataaaaccatg
aaaatgtgggaggtgcaaacaggttattgtgtgaagactttcacgggacatagagaatgg
gtgcgcatggtccgacccaaccaggatggtactctgctggccagctgttccaatgatcag
actgtccgtgtatgggtagtagctacaaaagaatgcaaggctgaacttcgagagcatgaa
catgttgtagaatgtatttcctgggcaccagaaagttcctacccaaccattttggaagca
actggatctgagactaaaaagagtggcaaacctggacctttcctgctgtcagggtccaga
gataagacgattaagatgtgggatattagcattggaatgtgccttatgacactggttggc
catgataactgggtacgtggtaccctctttcatcctggaggcaagtttattgtgagctgt
gctgatgacaaaaccattagagtgtgggactacaagaacaaacggtgcatgaagaccctg
aatgcacatgaacactttgttacctctcttgatttccacaagacgggtccatttgttgtc
actggaagcgtagatcaaacggtaaaggtctgggagtgccgctga
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