Chiloscyllium plagiosum (whitespotted bambooshark): 122563978
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Entry
122563978 CDS
T08871
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122563978 (hnf1ba)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122563978 (hnf1ba)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122563978
NCBI-ProteinID:
XP_043574295
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Position
28:14377621..14476259
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AA seq
613 aa
AA seq
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MVSKLTSLQQELLSALLSSGLSKDVLIQALEDLEPSRNFEVKLENLPVSPLKMNGSAAAE
GKAVFHSLTNGHSKGKLSGDEASEDGDDYDTPPILKELESLNTEEGAEQRAEVDRMLRED
PWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQ
EIQRQFNQTIQNTGNNMTDKSRPDQLLFLFPEFNQQDQGQGSEVGTEPANKKMRRNRFKW
GPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAHGLGSNLVTEVRVYN
WFANRRKEEAFRQKLAMDAYNVQSHSINPLLSHSSPHHPQPNSSPSSKHGHSLPGIFLHE
GSQGSPGYEHLHNHQCPNMASWQEVLLSQGGVRYGQQGTSEVSSSTAISHHGNSAMVTSQ
TVLQQVSPANLDPSHSLLSPDGKMITATGGPLPPVSTLTNIHSLSQPPHHNHQQTQNLII
NPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQQLHSPHQQPIMQQSQSHM
SQQPFMATVTQLQNSHMYTHKPDPPQYSHTTRFPSAMVVADTGSISALASMSSSKQVLKG
QTVTDYLHWLVNR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaaattgacatctctccagcaggagctgctcagcgctttactaagctccgga
ctttccaaagatgtcctgatccaggcgctggaagacctggagccctctcgcaacttcgag
gtgaaactggagaatctgcccgtgtccccgctcaagatgaacggctcggcggcggcggag
ggcaaagccgtcttccacagcctgaccaacggccacagcaaaggcaaactgtccggggac
gaagcctcagaagacggcgatgattacgacaccccgccgatcctcaaggagctggagtcc
ctgaacaccgaggaaggagccgagcaaagggctgaggtggacaggatgctcagggaggac
ccatggcgagcagcgaagatgatcaaaggttacatgcagcagcataacattccgcaaagg
gaagtggtggatgtgacaggtctcaatcaatctcacctctcacaacatctcaacaaggga
accccaatgaaaaatcagaaacgggctgctctctacacctggtatattaggaaacaacaa
gagattcagagacaattcaaccagactatccagaatactggaaacaatatgacagacaaa
agcaggccagatcagctgctgtttctctttccagagttcaatcagcaagaccaggggcag
ggctcggaggtgggcactgagcctgctaacaagaagatgcgtcgcaacaggtttaaatgg
ggaccagcatctcagcaaatattgtaccaggcttatgagagacagaagaaccccagcaag
gaggagcgggaggcactggtggaggagtgcaacagagctgaatgcatacaacgtggggtc
tcgccttctaaagcacatggactgggatcaaatctggttacagaagtcagagtgtataac
tggtttgctaatcgaaggaaggaggaagctttccgtcagaaacttgccatggatgcatac
aacgttcagtcacacagcatcaacccattgctgtctcacagttctccacatcacccacag
ccgaactcatccccctcaagtaagcacggccactcgctgcccggcatcttccttcatgaa
ggaagtcaaggttctcctggctatgaacatctccacaaccatcagtgccccaacatggcc
agctggcaggaggtgctactcagtcagggaggcgtgcgatatggccagcaagggaccagt
gaagtctcctcttccacagcaatcagccaccatggtaacagcgccatggtaacaagccaa
acagttttacagcaagtctcgccagcaaacctggacccaagccacagtctgctgtcacct
gatggcaagatgatcactgctacaggtggacctctgcctccggtcagcacgttgacaaat
attcacagcttgtcacaacctccacatcacaatcaccaacaaacacagaatctcatcatc
aaccccctctctggagtcatggcgatagcacaaagtataagcacatcccaggggcagagt
gttcctgttataaacagcgtgacagcaggtagcctggcagctctacaacctgtgcagttt
tcacagcaacttcacagtccgcatcagcagccaatcatgcagcagtctcagagtcacatg
tcacagcaaccgttcatggccacagtgacccagctgcagaactctcacatgtacacacac
aagccagatcctccccagtattcccacactacacgctttccatcggccatggttgtcgcg
gatacgggcagcatcagtgcactagcgagcatgtcctccagcaagcaggtattgaaaggg
caaacagtgacagattatctccactggttggtgaatcggtaa
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