Chiloscyllium plagiosum (whitespotted bambooshark): 122564030
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Entry
122564030 CDS
T08871
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122564030 (supt6h)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122564030 (supt6h)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122564030 (supt6h)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122564030 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Spt6_S1
Tex_central_region
SPT6_acidic
S1
HHH_3
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
122564030
NCBI-ProteinID:
XP_043574419
LinkDB
All DBs
Position
28:complement(21695102..21766942)
Genome browser
AA seq
1809 aa
AA seq
DB search
MCSPLPIPLPCFRNRGRWDEGAGRAVCRCTRAAIFKAFPCSAPLRQFGFSFLSGFSDERC
ILVHDTTVPRSFLFNVIKWPVIMSDFVESEAEESEEEYNEEGTVVQKKSKKFMDDDDEEE
EEEDENADDQDEQGNLKDFINDDDDDEEEEEEEDDDDDDGASEGSGGSDSITKKRKRKTY
DDRLEDDDFDLIEENLGVKVKRKKFRRVKKVSDDEDDEEEDTAKKGHEKEAIADELFPEF
EGEEGEQVEAPVVAPEEEEEEEEEESDIDDFIVDDDGQPIKKPKWKRKFPGYTDAALQEA
QEIFGVDFDYDEFEKYNEYDEELEDEYEFEDEELGEGETRVRPKKTTKKRVSRRSIFEIY
EPSELESSHLTDQDNEIRVTDMPERFQLRGIPVKPAEDDELEEEADWIYRNGFSTPTISL
QESSEYLERSQGVSNFSRKGPATIQKIKEALNFMRNQHFEVPFIAFYRKEYVEPELNIND
LWKVWQWDEKWTQLRTRKENLTRLFQKMQAYQYEQISADPDKPLADGVRALDTADIERLK
DVQSTDELRDVYNHFLLYYGRDIPKMQNASKPRKKKYKKNLQGGEDEEEGERDEEVEDDE
HHGPELKQASRRDMYTICQTAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLEL
AKDYVCSQFPTPEAVLEGSRYMVAMQIAREPLVKQVVRQTFQERAKININPTKKGKKDID
EAHFAYSFKYIKNKPVKELRDDQFLKMCLAEDDGLLTIDICIDMKGVEGYGNDQTYFDEI
KQFYYRDEFSHQVQEWNRQRSMAIERALNQFLYPQMGKELKNKLLIEARDYLCKCCSRKL
YNWLKVAPYRPDQQNEEDDDDFMEENQGKGVRVLGLAFSGERDTPVFCSLVNGEGEVTDF
LRLPYFLKRRNAWREEEREKKAHDIETLKKFLLNKKPHVVAVGGENRDALMVVEDIKRIV
HELEQEHQMSPIGVQLVDNELALLYMNSKKSENDFRDYPPLLRQAVSLARRVQDPLVEFA
QVCSSDEDIVCLKFHPLQEQVVKEELLNALYCEFINRVNEVGVDVNRAITHPHTQALVQY
VCGLGPRKGSHLQKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDS
YIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFA
EELERQGYGNKGITLYDIRAELSCRYKDLRVPCRAANSEEIFNMLTKETPETFYIGKLIT
CVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGACPGQAIGV
KTRLDNNVTGFIPTKFLSDKNVKHPEERVKIGMTVHCRIMKIDIEKFSVDLTCRTSDLMD
KNNEWKLPKDTYYDFDSEAADQKVDDDAKKKQQRTTYIKRVIVHPSFHNINFKQAEKMME
TMDQGDVIIRPSSKGANHLTVTWKVTDGIYQHIDVREEGKENAFSLGQSLLINNEEFEDL
DEITARYVQPMASFARDLLYHKYYQDCSGGDRKKMEELLSKSKREKPSFIPYFISASKEL
PGKFLLGYQPRAKPRVEYVTVTPEGYRYRGQIFPTVNGLFRWFKDHFQDPVPGITPSSTS
RSSRTPASMDATPANLNLADITRAVNALPQNMTTQMFNAIAAVTGQGQNPNATPAQWGSS
QYGYGGSSAYHVFATPAQQPVATPLMTPSYSYTTPSQPMTTPQYHGNATPQASVIPPSTT
RQRSQPKTSTAHTAVDWGKIAEQWLQEKEQERRKQKAKMTPRPSPSPMIEGTPMSIAGDA
TPLLDEMDR
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctccactccctatccccctcccctgtttccggaaccgggggcggtgggatgaa
ggagccgggcgggcggtttgtaggtgcacacgggcggccatttttaaagcatttccgtgc
agtgctccgctccgacagtttggattctcgtttctctcgggattttcagacgaaaggtgc
atccttgtacacgacactacagttccacgctcttttctttttaacgttataaaatggcct
gtgatcatgtctgattttgttgaaagtgaagctgaggaatctgaggaagagtacaatgaa
gaaggaactgtagtacagaagaaatctaaaaaattcatggacgatgatgatgaggaagaa
gaggaggaggatgaaaatgcagatgaccaggatgagcagggaaatttaaaggacttcatt
aacgatgatgacgatgatgaagaggaagaggaggaggaggatgatgatgatgacgatgga
gccagtgaaggttctgggggttcagactctatcacaaagaaaagaaagcgtaaaacttat
gatgacaggctggaagatgatgattttgacctaattgaggaaaacttgggtgtcaaagtc
aaaaggaaaaaattccgacgtgtgaaaaaagtatctgatgatgaagatgatgaagaagaa
gatactgcaaagaaagggcatgagaaagaggctatcgctgatgaactttttccagaattt
gaaggtgaagagggagaacaggttgaagcaccggtggtagccccagaagaagaggaggag
gaagaggaggaggagtcagatattgatgacttcattgttgatgatgatggacaaccaatc
aaaaaaccaaaatggaagaggaagttcccaggttacacagatgctgctcttcaagaagct
caggagatctttggagtagattttgattatgacgagtttgaaaaatacaatgaatatgat
gaggaacttgaggatgaatatgagtttgaagacgaagaattgggagaaggtgaaacaaga
gttcgcccaaaaaaaaccaccaaaaaacgtgtcagccgccgtagcatctttgagatttat
gagcctagtgaactggagagcagtcacctcacggaccaggacaatgagatcagagttaca
gacatgccagaaagattccagcttcgtggcattccagttaaacctgccgaagatgatgaa
ctagaggaagaggctgactggatttatagaaatggattctcaacgccaaccatttctttg
caggaaagctcagagtacctcgaacgaagccagggtgtcagcaacttcagccgcaaaggc
cctgccacaatccagaagataaaagaagcactgaattttatgaggaaccagcattttgag
gtgcctttcattgcattctacagaaaggagtatgtagagccagaactgaacatcaatgac
ttgtggaaggtctggcaatgggatgaaaagtggacacagctgagaactcgaaaggaaaac
cttacgcgactgttccagaagatgcaagcgtaccagtatgagcaaatctctgctgatcca
gacaaacccctggctgatggagttagggcacttgacacagcagacattgaaagattgaaa
gatgtacagtcgactgatgagttgagagatgtctataatcatttcctactgtattatggt
cgtgatattccaaaaatgcaaaatgcatcaaagccaaggaaaaagaaatacaaaaaaaac
ctgcagggtggagaagatgaagaggaaggagagagggatgaagaggttgaagatgacgag
catcatgggccagaacttaagcaggcttctcgcagagacatgtataccatctgccagaca
gctggtctagatggtcttgcaaagaaatttggtctgacccctgaacagtttggtgagaac
ctgagagacagttaccagcgacacgaaactgaacagtttcccgctgaaccactggaactt
gcaaaagattatgtctgcagtcaatttccaacacctgaggctgtactggaaggttctcga
tacatggtggccatgcagattgcccgagaaccattggtcaagcaagttgtaagacagacc
ttccaagagagagccaagattaatattaatcccacaaaaaaaggcaaaaaggatattgat
gaagcccactttgcctattcattcaaatatataaagaacaagccagtcaaggaattgaga
gatgatcagttcctcaaaatgtgccttgctgaagatgatggcttactaacaattgacatc
tgtattgatatgaaaggagttgagggttatgggaatgaccagacttattttgatgaaatc
aagcaattttattaccgtgatgaattcagccatcaagttcaagagtggaacagacagcgc
agcatggcaattgaacgtgcactaaaccagttcctctacccacagatgggtaaagaactg
aaaaataagttgctaattgaggcaagggactatctttgcaagtgttgtagccgtaaactt
tacaactggctgaaagttgcaccatatcgacctgaccagcagaatgaagaagatgatgac
gacttcatggaagaaaatcagggtaaaggagttcgagtgcttggtttggcattttcagga
gaaagggatacaccagttttctgttctcttgttaatggagagggtgaagtgacagatttc
cttcgtctgccttattttttgaagcgaaggaatgcatggcgagaggaagagagagagaaa
aaggcacatgatattgaaactttgaaaaagtttcttctaaataagaagccccatgttgtg
gctgtaggtggagaaaatagggatgcacttatggttgtagaggacataaaacgaatagta
catgaattagaacaggagcatcaaatgtcacccattggagtacagctggtggacaacgag
ctagctcttttgtacatgaatagtaaaaagtcagagaatgactttagggattatccacca
ttgctacgtcaagcggtatcattggctcgtcgggtacaggatccacttgtagaatttgct
caagtttgcagctcagatgaagacattgtttgcctcaagttccatccattgcaggaacaa
gttgtaaaggaagaattattgaatgcactttactgtgagttcataaatcgagtgaatgaa
gtaggtgttgatgtaaacagagcaataactcatccacatactcaggcattggttcagtat
gtctgtgggctgggacctcgcaaaggatcgcacctacagaagatcctcaaacaaaataac
actcgcctggaaaacaggacccagctagttacgatgtgccatatgggcccaaaggtcttc
atcaattgcgcaggctttattaaaatagataccgcatcattaggggacagtactgattcc
tacattgaggtcctcgatggctcaagagttcaccctgaaacttatgaatgggccagaaag
atggctgtggatgcacttgaatatgatgagtcagcagaagacgccaacccagctggagca
ctggaagaaattttggaaaatcctgagcgactgaaggatcttgaccttgacgcatttgca
gaagaactggagaggcagggctatggtaacaaaggtatcacattatatgatattcgagct
gagctgagttgcaggtacaaggatttaagagttccatgtcgtgcagcaaactcggaagaa
attttcaacatgttaacaaaagaaactccagagacattttacattggtaagttgatcaca
tgtgttgtgacagggattgctcacaggaggcctcagggtgaaagttatgatcaagctata
aggaatgatgaaactggactctggcagtgtcctttctgccaacaagacaacttcccagaa
cttagtgaggtttggaatcattttgacagcggtgcctgccctggccaggctataggtgta
aaaacaaggctagacaacaatgttacaggtttcattccgacaaaattccttagcgacaaa
aatgtgaagcatcccgaagaaagggtcaagattggtatgactgtacactgcagaataatg
aagatagatattgaaaaatttagtgtcgatcttacctgtcgaacatctgatctcatggac
aagaacaatgaatggaagttgcccaaggacacatattatgactttgattctgaggcagca
gaccaaaaggtagacgacgatgcaaagaaaaaacagcagcgcacaacatatatcaagcga
gtaatagtgcacccctcgttccacaatatcaacttcaagcaggctgagaagatgatggaa
accatggaccaaggagatgttatcatcagacctagcagcaaaggagcaaaccacctcact
gtaacctggaaagtgactgatgggatctatcaacatatagacgtaagagaagaaggcaaa
gagaatgcctttagcttgggacagtctcttttgatcaacaatgaggagtttgaagatctt
gatgaaatcactgctcgctatgtgcaaccgatggcatcatttgctcgtgacctgctgtat
cacaaatattaccaggattgcagtggcggagatcgcaagaaaatggaggaactgctatca
aaatccaaaagagaaaagccgtcttttattccctattttatttcagcatcaaaggaattg
ccaggaaaatttttgttaggctaccaacctcgtgctaaaccaagggtggagtatgttaca
gtaacaccagaaggataccgctacagggggcaaattttcccaactgtgaatggactgttt
agatggtttaaggatcactttcaggatcctgttccaggtattacaccttcaagtacaagc
agatccagcagaacacctgcctctatggatgcaacaccagctaatcttaatttggcagat
attacacgagcagttaatgctctcccacagaacatgacaacgcaaatgttcaatgccata
gcagctgttactggacagggtcagaacccaaatgctactccagcacagtggggatctagt
cagtatggctatggaggaagcagtgcctatcacgtttttgcaactcctgcacagcagcca
gtagcaacaccattgatgactccaagctattcatacacaacacccagtcaaccaatgaca
acacctcagtaccatggtaatgctacacctcaagcttctgtcataccgccatctacaaca
cgacaaaggtcgcagccaaagacttcaactgctcatactgcagtagactggggtaagata
gcagaacagtggctacaagagaaagaacaggaaaggcgaaaacagaaagcaaagatgaca
cctcggccttcacctagtcccatgattgaaggcaccccgatgtccatcgcaggtgatgcc
acaccattactagatgaaatggatcggtag
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integrated database retrieval system
