Chiloscyllium plagiosum (whitespotted bambooshark): 122564058
Help
Entry
122564058 CDS
T08871
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137
Mitophagy - animal
cpla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122564058 (rabgef1)
04137 Mitophagy - animal
122564058 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122564058 (rabgef1)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122564058 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
122564058 (rabgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
122564058
NCBI-ProteinID:
XP_043574473
LinkDB
All DBs
Position
28
Genome browser
AA seq
532 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYSKARQRQIQEDWELAER
LQREEEAAYASSQGAPSLTFSKFEEKKTNETKRKVQTVKKFFSPSSRAAPKKVNQAKVHK
HGLGGRECNADNILRDLKEIFTPPWELASPTEVADSQEVKASSPSINRQTSLETERASKD
FIDFLKSFRKPGQDILKQCRGFIESMQHKKELSIEEQSECVQDFYQNMVDRLQTHSTFKG
SSERIDKLMDQIENFIMTRLYKNVFCPETTDDEKKDLAIQKRIRALHWVTLEMLCVPVNE
EIPEVYELVVKAITAVIEMDSRRVPREKLTCITQCSKQIFNAIKITKNEPASADDFLPTL
IYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLTQE
DFDRYMSGQASPKKQDSEEWSPEACPGLKQMYKNLNLISQLNERQQKILSDAKQLEKDLI
DWSEGVTKDIEDIIEKYPLEIKPKGQPVAAIDSDNVENDKLPPPIQPQVFIG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaaatcagaacgaagaggaattcatgtggaccagtcagaactgctgtgtaag
aaagggtgtggttactatggaaatcctgcttggcaaggtttttgttccaagtgttggaga
gaagaatacagcaaagcgagacaacgacaaattcaggaagattgggagcttgcagaacgt
ttacagcgtgaagaggaagctgcttatgctagcagtcaaggggctccatcactcaccttt
tctaaatttgaagagaaaaaaacaaatgagacaaaaagaaaagtccagactgtcaaaaag
ttcttcagtccatcatcccgggctgcaccaaagaaagtgaatcaagccaaagttcataag
catggattaggtgggagggaatgcaatgcggataacattcttagggatttgaaggagatt
tttactccaccgtgggagctggcttctcctactgaagtagcagacagtcaggaagttaaa
gcctcaagtccatccataaataggcaaaccagcctagaaacagaacgagcatctaaggat
tttattgatttccttaagagctttcgcaagcctggtcaagatatactaaaacaatgcaga
ggatttattgagtcaatgcaacataaaaaggaattgagcattgaggaacaatctgagtgt
gttcaggacttctatcaaaatatggttgaccgactgcagacacactccacttttaaaggt
tcctctgagcggatagacaaattgatggaccagattgaaaacttcatcatgacgcgactg
tacaagaatgtgttttgtccagagacaactgatgatgagaaaaaagatcttgcaattcag
aaaagaatcagggcattgcactgggtgactcttgaaatgttatgtgttccagtgaatgaa
gaaattcctgaagtttatgaattggttgtgaaagcaattacagctgttattgaaatggat
tcacgacgtgttccccgtgaaaaattgacctgcatcacacaatgcagcaagcaaatattc
aatgctataaagatcacaaagaatgagcctgcttctgctgatgacttcttacccacactt
atctatattgttttgaaagctaatccacctcgcttacagtcaaacatccagtacattact
cgattctgcaatccaagcagactaatgactggagaagatggatattatttcacaaattta
tgttgtgctgttgccttcattgaaaaattggatgcccaatctttgaacctgactcaggaa
gattttgatcgctatatgtctggccaagcatcacccaagaagcaggactctgaagaatgg
tctcctgaagcatgtccaggactgaagcagatgtacaaaaacttaaatcttatttctcaa
ctgaatgagagacaacaaaaaattttgtcagatgctaagcagcttgaaaaagatctaatt
gactggagcgaaggtgtgacaaaagacattgaagatattattgagaaatatccacttgaa
atcaaacctaagggccaaccagtggctgcaattgattctgacaatgtagaaaatgacaag
cttccaccaccaatccaaccacaagtattcattggttga
DBGET
integrated database retrieval system
