Chiloscyllium plagiosum (whitespotted bambooshark): 122564063
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Entry
122564063 CDS
T08871
Symbol
si:ch211-283g2.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122564063 (si:ch211-283g2.1)
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122564063 (si:ch211-283g2.1)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122564063
NCBI-ProteinID:
XP_043574488
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Position
28:26373920..26468705
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AA seq
611 aa
AA seq
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MKNIEMSNSMEKINSLKTRKACDVTGQSVENANKNENTQNRVTWTRKIEFTLAGIGYSVG
LGNVWRFPFLCYRSGGGAFLIPFFIMFALLGIPLLYLEISIGQYLRTGPVESLAKICPLL
KGVGIATVAISFVMCTYYNLIICWAMYYLINSFQNPLPWHSCNNTWNIQETCTDSITTNN
ITVSASQQFFDYNVLQKTNGLDNLGNMRWELFGLLILAWVIVYFCIFKGVTWTGKVVYFT
ALFPYVVLLAILINNVQLPGAIIGINYFANPKWEKLKEVQVWVYAAVQVFNSIGIGFGSL
ISMSSYNKFDNNILRDSLAISLTNAATSIFSGFVIFSAFGYMSHMINVPIDDIAVDGPGL
VFVVYPEAFVTMPVSPLWAVLFFVMLLFLGLDSEFAMVEVMVTSLLDAYQDWLLKYLKRK
EFVVLGVCVVAFLLGIPNVTQGGIYVFQLLDHYTAQVSIVFLAFFEVVAVCCLFGISRLS
QNIEEMLGKKPNIYLRVCWLLSPILILIIMVFVIIDFEPVRYSTYQYPEWGQGLGWLIAF
VSLIWIPVGVIHTLLTLKGSFYERLISSITPFGFDHDRKQTGVTKTEPLQDIPMAGKSPA
LQNEMLKNTSI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatattgagatgtccaactccatggaaaagataaactcattgaagacaagaaaa
gcatgtgatgtcactggacaaagtgttgaaaatgctaataagaatgaaaatacccaaaat
agagtgacttggactcgaaagattgagtttacattggctggaatcggctattcagtgggt
ttaggcaatgtctggagattccccttcttgtgctataggagtggaggaggagcatttttg
attcccttcttcattatgtttgcgctactcggaatcccacttctctatctggaaatatct
attggacaatatttaagaactggaccagttgaatccttagccaaaatctgtcccctgctc
aaaggtgttggcatagcgacagtggccatttcctttgttatgtgcacatattacaatctt
atcatctgctgggccatgtattatctcatcaattcctttcagaacccactgccttggcac
agctgcaacaatacctggaatattcaagagacctgcacagatagtattaccaccaacaac
attactgtttcagcaagtcagcaattctttgattacaatgttcttcagaagacaaatggt
ctggataaccttgggaatatgcgctgggagctttttggtcttctgattcttgcctgggtg
attgtttatttctgtatatttaaaggggtaacatggactggaaaggttgtatacttcact
gcactcttcccttatgtagtgttgcttgcaatcctcattaacaatgtgcaacttccagga
gctataatcggaatcaattactttgcaaatccaaagtgggagaaattgaaggaagtccag
gtatgggtttatgctgctgtccaggtcttcaattccattggcattggctttggctcatta
atttccatgtcaagttacaacaagtttgacaacaatattctcagagattcgttggccatc
tcattaactaatgcagccacaagtatcttttctggatttgtcattttctctgcatttggc
tacatgtcccatatgattaacgtccctattgatgatattgctgtggatggcccagggttg
gtgtttgtggtttacccagaagcctttgttacgatgccagtttctcccctgtgggcggtt
ctcttttttgttatgttactgtttttgggtcttgatagtgagtttgctatggttgaagtg
atggtgacaagtctattggatgcctaccaagattggctactgaaatatttgaaaaggaaa
gagtttgtggttttgggtgtctgtgttgtagcctttttgttaggaattccaaatgtcaca
cagggtggaatatacgttttccagctgctggaccactatactgctcaagtgtccattgtt
ttcctggctttttttgaggtggttgctgtttgctgtctttttggtatctctcgattgtca
cagaacattgaggaaatgctggggaaaaagccaaatatttacttgcgagtgtgttggctg
ctgtcacctatactgatactcattattatggtgtttgttatcatcgactttgagcctgtg
cgttacagcacctatcagtacccagagtggggtcaaggtcttggctggctcattgctttt
gtttcactcatttggatccctgtcggagtcatccatacgttactcacattgaaaggttca
ttctatgagagactcattagctcgatcactccttttggtttcgatcatgaccggaagcaa
acaggagttacaaagactgagcctttacaggatattccaatggctggcaagtcaccagca
ctgcaaaatgaaatgttgaagaacacttccatttaa
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