Chiloscyllium plagiosum (whitespotted bambooshark): 122564201
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Entry
122564201 CDS
T08871
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122564201 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122564201 (trpv1)
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122564201 (trpv1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122564201
NCBI-ProteinID:
XP_043574830
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Position
28:1655563..1722474
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AA seq
831 aa
AA seq
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MKRLQSDEADQSEVTDETGLNPDTDDVFTEDEELESSFPAAGYSQELSKGPSISPSNLLK
RTQQRYHFRETDSSKAKAPMDSFFPKGYQTSPKSSTVSAQENVKMQSLGSARSSEGNLVF
KAYEWQWLFKAVSGGKASELDGLLEYLIKNNERLTDWKLRDPETGKTALLKALLNLNNHR
NDTIPVLLEIAEKTDNLTQFVNAAYSDSYYKGQTALHIAIERRCMHFVALLVRNGADVHA
KANGIFFKQKEGQTGFYFGELPLSLAACTNQLDVVTHLLENPYSPADISATDSMGNNVLH
ALVSISDNTKENTKFVIHMYDYLLRMGVKINPELNLESMKNKKGLTPLKLAAKTGKIEVL
KHIIGREIHDEECRFLSRKFTEWAYGPVHSSLYDLSALDTYEAKSVLEIIIYGSETPNRH
EMLNLEPLKHLLQEKWNNFASFIFYIKFFIYLSYMIIFTTTAYNRIEEQKPPFKVEATTE
SYLRVTGQVITIFGALYLFFQGVEEVFLRRKRTPKSITIDGYCDILFFLQAVLLLASSVL
YVVGREEYVGFMVIGLAIGWINLLYYTRGFQRMGIYSVMMQKIFLTDIMSFLLVYVVFLF
GFGAALVVLIEDRVYNNTKPGCHKETTYKNFKTTFLELFRFTIGMGDLEFTENYRFKEVF
IFLLISYVILTYILLLNMLIALMSKTVEKISKDSKSVWNLQRAITILDLEKSLPRFLRAR
FRSGEPVTVGLLSDGREDLRWCFRVDEVNWTRWNTNLGLINEEPGNSEITRRMTGSRGRR
ARRERSWRTMLPLLKEIKPEKQEEDVRLGAINTGPARQPPGQSHGTTAKAV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggttgcagagtgatgaagctgaccagtctgaggtcactgacgaaactggtttg
aatccggacaccgatgatgtgttcaccgaggatgaggagctggaaagttcctttccagct
gctgggtattcccaagagctgtcaaagggcccttcgatatcgccatccaaccttttaaaa
aggacacagcaacgttaccacttccgtgaaactgattcctcaaaggctaaggcaccgatg
gattcctttttcccaaaaggctaccaaacgtcaccgaaatcgagtacagtgtcagcccag
gagaatgtgaagatgcaatccttaggttcagccagaagcagtgagggaaacttggtcttc
aaagcctatgagtggcaatggctgtttaaggcggtgtctggaggcaaggccagtgagtta
gatggcttattggagtatctgatcaagaacaatgaacgtctcactgactggaagctcaga
gacccagagacagggaaaactgctttgctgaaggcactgttaaacctgaacaaccacagg
aatgacacgatcccagtgctactggaaatcgcagagaaaactgacaacctgacccagttt
gtcaatgcggcctacagtgacagctactacaagggtcagacagcgctgcacattgccatt
gaacgccggtgtatgcactttgtggctctcctggtccgtaatggtgctgatgtccacgcc
aaggccaacggtatcttcttcaagcaaaaagaaggccaaactggcttttacttcggggag
ctgcctctctcactggctgcctgtacaaaccagctggacgtggtgacccacctgttggaa
aacccgtacagtccagcagacatctcagccaccgactccatggggaacaatgtgctccac
gcattggtgtccatctccgacaacaccaaggagaacaccaaatttgtcatccacatgtat
gattacctgctgaggatgggggtgaagatcaacccagagctgaacctggaaagcatgaag
aacaagaaaggactaacccccttgaaactggctgcaaagacgggcaaaatcgaggtgttg
aaacacatcattggcagggagatccacgatgaggaatgtcgattcttgtccaggaaattc
actgaatgggcatacggtccagtgcactcgtctctgtatgacctctcggctctcgacaca
tatgaagcaaagtcggtgttggagattatcatctatggcagtgagactccgaaccgacat
gagatgctaaacttagagccgctgaagcacctgttacaggagaagtggaacaactttgcc
agcttcatcttttacatcaagttcttcatttacctctcctacatgatcatcttcaccact
acagcctacaataggattgaggagcaaaagcccccattcaaagttgaggccacaactgaa
agctacctacgggtcactggacaagttatcacaatcttcggagcactctatcttttcttt
caaggggtcgaagaagtctttctgcgaaggaagaggactccaaagtcaatcacgatcgat
ggttactgtgatattttattttttctccaggcagtgctgctcctggcctcctctgtgctg
tatgtagttggacgggaagaatatgtcggatttatggtgatcgggctggcgattggctgg
atcaatctgctctattacacccgcggattccagcgaatgggcatctacagtgtcatgatg
cagaaaatcttcctgacagatattatgagttttctgcttgtgtatgtggtcttcctcttc
ggatttggagctgctctggtggtgcttattgaagaccgggtttacaataacaccaaacca
gggtgtcacaaggaaaccacgtacaagaattttaaaacaaccttcctggagcttttccgg
ttcaccatcgggatgggagatctcgaattcaccgagaactacagattcaaagaggttttc
atcttcctgctgatatcttacgtcatcctgacttacatcctccttctcaacatgttaatt
gcactgatgagcaagacggtggaaaaaatctccaaggacagtaaaagtgtttggaatctg
cagcgagcgattaccattttagatttggagaagagcctgccgaggtttctgagagctcgg
ttccgttcaggggagcctgtgactgtgggtctgctgtctgatggaagggaagacctgaga
tggtgcttcagagtcgatgaagttaattggacacgatggaatacaaaccttggcctcatc
aacgaagagccaggaaactcggaaattaccagacggatgacggggagcagagggaggaga
gctcgccgggagaggagctggcggacaatgctgcccctactgaaggagattaaacctgag
aaacaggaagaggacgtgcgactgggtgcaataaacactggcccagcaaggcagcctcct
ggacagtcacatggcacaactgcaaaagctgtttaa
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